Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02621 ATGTACACAGATCGACAAAGAAAAGACGGTTATTGTAAATACTCAGCTAGAGAACAGGTTTTAGGTGAGTTAAGAAGGTTGTTAGAGAAATATTCCAACGAGGAAGTTAGTATAACGGTAACCGGACATAGTTTAGGAAGTGCAATAGCAACGTTAAGTGCTTATGATATAGCGGAAACAGGGTTGAATGTTAGGAAAGATGGAAGAAAGGTTCATGTTTCGGTGTTTTCGTTTTCAGGGCCTAGGGTTGGGAATATAAAATTTAAATGGAGGTTGGAAAGGAGTTTGGGGATTAAGGTTTTGAGGGTTCATAATAAGCATGATTTAGTGCCGAAATCTCCGGGGGTTTTGATGAATGAGAAGTCGCCGATGTGGTTGTTGAAGATGGCGGGGGATATTGATATTCCATGGTGCTATACTCATGTGGGAGTTGATTTGGAGTTGGACCATAAAGTTTCGCCATTTTTGATACGTGAAGTAGACCCTGCGTCTGCTCATAATTTGGAGGCCCAGTTGCATTTACTTGATGGATACCATGGGAAAAACCGTGAGTATGCGGCAACAACTTATAGAGACGTTGCATTGGTGAACAAGGGTTGTGACTTTGTGAAAGATGAATTCTCTGTGCCACCAAAGTGGAGGCAAGAATTGAACAGGAATATGGTGAAGACTGAAAATGGAAAGTGGATTCTTGCTCAACGACCTCAAGTTGCTGAAACACCTAATGAAGATATTGGCTCTTATCTCGCGCAGATAGGCATCACTGTACCTAATTAA 777 0.4131 MYTDRQRKDGYCKYSAREQVLGELRRLLEKYSNEEVSITVTGHSLGSAIATLSAYDIAETGLNVRKDGRKVHVSVFSFSGPRVGNIKFKWRLERSLGIKVLRVHNKHDLVPKSPGVLMNEKSPMWLLKMAGDIDIPWCYTHVGVDLELDHKVSPFLIREVDPASAHNLEAQLHLLDGYHGKNREYAATTYRDVALVNKGCDFVKDEFSVPPKWRQELNRNMVKTENGKWILAQRPQVAETPNEDIGSYLAQIGITVPN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02621 258 Gene3D alpha/beta hydrolase 1 244 IPR029058 -
Vifa5g02621 258 CDD Lipase_3 15 150 - -
Vifa5g02621 258 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 235 - -
Vifa5g02621 258 Pfam Lipase (class 3) 15 116 IPR002921 GO:0006629
Vifa5g02621 258 SUPERFAMILY alpha/beta-Hydrolases 15 153 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02621 Vifa-Chr5 873554793 873561066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02621 1 257 Acyl Lipid Metabolism Gene Families AT2G30550 50.000 3.57e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02621 - - cam:101506071 414.461