Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02604 ATGGAAGCAAATATTTGTAGCCAAAACAGAATTTCAAAACTAACTTGTTCAACTCACTTCAATCTCATCAAACATAAACCTCAACATCAACCTTCCGTAGTTTCCGTGCTTAGAAACACTTCAAATCACAACATTAATGAAGAAACAACCAAAAATAATACTAGTAATGTTTACAAAGATAGTTGGTTTGATCTCATAGCTATAAACCATTTATCACAAAGTGTTCAAGCTGCCACAGGAATCAGAAACAATGAAAGTGGCTATGAGAGTCTTGTTGAGGCGGCTATTATGGCGAAACAGAAATTTAATTCTATTCAGCAGCAAGAAGTTATCATTCAAGTTCTAAATAGACTCTTCCCAGAGTCGCTATTTTTATTGATAAGGAAATTGCTACCACCATGTAAATTCACAAGGGAACAATTTGCCATTTTCACCACTTTGTTTTTTACTTGGTTACTTGGGCCATCTGAGGTTAGAGAATCAGAGGTCAATGGAAGAAGAGAAAAAAATGCAGTCTATGTCAAAAAATGCAGGTTTTTAGAGGAGACAAATTGTGCAGGGATGTGTATTAATCTTTGCAAAATTCCAACTCAATCGTTTATAAAGAACACTCTTGGTATGCCAGTGAACATGATACCAAATTTTGATGACATGAGTTGTGAGATGGTATTTGGGCAGGATCCTCCATCATCAACCGACGATCCATCACTAAATCAACCATGCTATAAACAATGCAAGGCATATAAAAATCATGGAACAAACTGCCTCAATTAA 774 0.3553 MEANICSQNRISKLTCSTHFNLIKHKPQHQPSVVSVLRNTSNHNINEETTKNNTSNVYKDSWFDLIAINHLSQSVQAATGIRNNESGYESLVEAAIMAKQKFNSIQQQEVIIQVLNRLFPESLFLLIRKLLPPCKFTREQFAIFTTLFFTWLLGPSEVRESEVNGRREKNAVYVKKCRFLEETNCAGMCINLCKIPTQSFIKNTLGMPVNMIPNFDDMSCEMVFGQDPPSSTDDPSLNQPCYKQCKAYKNHGTNCLN 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02604 257 Pfam Beta-carotene isomerase D27-like, C-terminal 151 232 IPR025114 GO:0005506
Vifa5g02604 257 PANTHER BETA-CAROTENE ISOMERASE D27 29 255 IPR038938 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa5g02604 Vifa-Chr5 869480709 869483413 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02604 K17911 - gmx:100813404 333.954