Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02593 ATGAATTTTCATTCAAAATTTTGTACAATCTTGATCATTTTCTTCGGTACCCTAATTTCTCATGCATTTTCTCTTTCGATCAGTTTAAACGATGTCGAATGTATATCCGAACATGTTCCACATGACAATGACCTTGTTTCTGGAAACTTTGTTGTAATGGATCATGATATTTTTTGGAGCTCAGATCATCCTGGAATCGATTTCACTGTGACATCTCCCGCAGGAAATGTGGTACATTCTTTGAAGGGAACATCGGGAAATAAATTCGAGTTCAAAGCGGCGCAAAGTGGAATGTACAAGTTTTGCTTTAATAATCCGGTTTCTACGCCAGAAACTGTGTCATTTTATGTTCATGTTGGCCACATTCCAAATGAGCATGACTTAGCTAAAGATGAGCATTTGGATCCAATAAATGTGAAGATTGCTGAGTTAAGAGAAGCATTAGAATCTATTGTAACAGAACAAAAGTACTTGAAAGCACGTGATGCTAGACATCGACATACAAATGAGAGCACCAGAAAACGTGTTGTATTTTACACACTCTTGGAGTATATTTTATTTGTGACTACAAGTGTATTGCAAGTTGTATACATTCGTCGTCTCTTCAGCAAATCATTTGCTTATAATCGGGTGTAG 636 0.3664 MNFHSKFCTILIIFFGTLISHAFSLSISLNDVECISEHVPHDNDLVSGNFVVMDHDIFWSSDHPGIDFTVTSPAGNVVHSLKGTSGNKFEFKAAQSGMYKFCFNNPVSTPETVSFYVHVGHIPNEHDLAKDEHLDPINVKIAELREALESIVTEQKYLKARDARHRHTNESTRKRVVFYTLLEYILFVTTSVLQVVYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02593 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 35 128 IPR036598 -
Vifa5g02593 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Vifa5g02593 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10 204 IPR015720 -
Vifa5g02593 211 Pfam emp24/gp25L/p24 family/GOLD 23 202 IPR009038 -
Vifa5g02593 211 SMART EMP24_GP25L_2 22 203 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02593 Vifa-Chr5 863104976 863106091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02593 K20347 - gmx:100789501 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02593 5 863104976 863106091 Vifa5g02593 5 863104976 863106091 ECH