Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02546 ATGGGGACTCTGTCGCTTGAACCCGATGATGTAACCTCGGATATATACCTTTCGTTGGGCCTTAAAGATATCGATAAAGGTGTTGGAGTTCCAAGGGTTTTGTCACTTCTCGCTTCACTTCTTGAGAGATCTGTTCAGAGAAATGAAATGCTATTGGAAACGAAACATGTAGAAGATGTTGTTACAGTGTTTCACGGTTTAAGAGCGCCTGCTCTGAGTGTTCGTAAGTACATTGACCGTATCTTTAAGTACTCGAGTTGCAGCCCATCGTGTTTTGTTGTCGCGCATGTATATGTGGATAGGTTCATTCAGCACACAGAGATCAAATTGACCTCACTTAATGTGCACCGGCTTCTCATAACCAGCATTATGCTAGCAGCAAAGTTTATCGATGACGCATTCTTCAATAATGCTTACTATGCTAAAGTTGGAGGTGTAAGTACATCAGAATTAAACAGATTGGAATTGAGCTTTTTGTTTGGTATAGATTTTAGACTTCAGGTTAGTGTAGACACATTTGGAAGATATTGTTTGCTATTGGAGAAGGAAGGTTCAGAAACACTTCAAATTGAAAGACCAATGCAGGCTTGTAGAATTAAAGAAAGTTGGTCAAACAAAGATGAGCCTCCATGTGCTGCCACAATTGCAAGATGGTAG 657 0.4033 MGTLSLEPDDVTSDIYLSLGLKDIDKGVGVPRVLSLLASLLERSVQRNEMLLETKHVEDVVTVFHGLRAPALSVRKYIDRIFKYSSCSPSCFVVAHVYVDRFIQHTEIKLTSLNVHRLLITSIMLAAKFIDDAFFNNAYYAKVGGVSTSELNRLELSFLFGIDFRLQVSVDTFGRYCLLLEKEGSETLQIERPMQACRIKESWSNKDEPPCAATIARW 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02546 218 Pfam Cyclin 59 166 IPR013922 GO:0000079|GO:0019901
Vifa5g02546 218 Gene3D - 26 210 - -
Vifa5g02546 218 PANTHER UNCHARACTERIZED 26 203 IPR013922 GO:0000079|GO:0019901
Vifa5g02546 218 SUPERFAMILY Cyclin-like 77 166 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02546 Vifa-Chr5 846642226 846642959 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02546 - - gmx:100805926 382.104