Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02534 ATGGAATCAAGTCATGTAATATCCATTACAAATGAAGAGGAAGAAAACAACAACAATATAACTCAAATGAAGAAAAATAAAACCATTGTTCCAATTACTTCCTATCCAGGAGACAACAAAAATTATAATAAGCAGAAAAAAAGTGAGCAAGACATCAAGAAATTGATCCATAGCACCAAAGTTGGATTCTCACTTGTTTTGGTTTCACTTCTTTATATTTTGAATCCTCTTTTTGATCAAGTTGGTGAAAATGCAATGTGGGCTATCATGACTGTCGTTGTCATCTTTGAATTCAATGCAGGAGCTACACTTGGAAAAGGGTTCAACCGTGGAATAGGGACTATTGTAGGAGGAGGATTGGGATGTTCAGCTGCAATATTGGCACAAAAAATTGGAGGAGTTGGTAACTCAATATTCATTGGATCATCAGTGTATATTCTTGGATCATGTGCTACATATTTTCGATTTGTTCCAAGAATAAAGAAGAGATATGATTATGGAGTAGTGGTGTTTATGTTAACATTTAATCTAGTAGTGGTATCTGGAGCAAGACCTGGATTTAAAGTTTGGGAGATTGCAAGAGAACGTTTGTTGAATATTTTGATGGGATTCATTGTTGCAATTTGTGTGAGTTTGTTCGTTTTTCCAACGTGGGCCAGTGATGAACTTCATGATTCTATTGTTGAAAGGTTTCATCATCTTGCTAATACAATTCAAGGTTGCTTAGAGGAATGTTCAAAATCAGTCAAAGAGAAGGAAAGTCAACTAGATACCAGCTTCACAGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAAGATGAATCATTGGCAAATTTTGCAAAATGGGAACCTTGGCATGGAAAATTTGGACTTTCCTATCCATGGGAAAAGTACTTAAAAATTGGAGAAGTTCTTCGAGAACTAGCTGCACTTATTCTTGCGTTGCAATGTTGCATCCATGCCTCAAAAAAGCCCACAGCATCTTTGAAGCAGTGTGAAACAATTGGGTCAAATGTTGTATGGACTCTACGAGAAGTTGGAGATAGCATGAAACAAATGAGGAAATGTGAAGAAAGGGACAACATTATAACTAAGTTGAAAACAACTAGAGAAGAGTTGAGTTTGGTGATTTCTATTTCCATGGTTGAAGAATTTGAGAATGATGAAAGGGTAGCAATTGCAAGTTTGGTGTTTTTGCTAATGGAAGTGGTGGAGAAGGTAGGTGAATTGGTTATAAAGGTTGGAGAACTTCAAGATGTAGCGGGTTTTCGCACCCTCGTAACTCCGGTGTCTATGTAG 1299 0.3687 MESSHVISITNEEEENNNNITQMKKNKTIVPITSYPGDNKNYNKQKKSEQDIKKLIHSTKVGFSLVLVSLLYILNPLFDQVGENAMWAIMTVVVIFEFNAGATLGKGFNRGIGTIVGGGLGCSAAILAQKIGGVGNSIFIGSSVYILGSCATYFRFVPRIKKRYDYGVVVFMLTFNLVVVSGARPGFKVWEIARERLLNILMGFIVAICVSLFVFPTWASDELHDSIVERFHHLANTIQGCLEECSKSVKEKESQLDTSFTVCKSVLNSKSKDESLANFAKWEPWHGKFGLSYPWEKYLKIGEVLRELAALILALQCCIHASKKPTASLKQCETIGSNVVWTLREVGDSMKQMRKCEERDNIITKLKTTREELSLVISISMVEEFENDERVAIASLVFLLMEVVEKVGELVIKVGELQDVAGFRTLVTPVSM 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02534 432 Pfam Aluminium activated malate transporter 49 378 IPR020966 GO:0015743
Vifa5g02534 432 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 46 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02534 Vifa-Chr5 838701929 838704088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02534 45 421 Miscellaneous Gene Families AT1G08440 36.693 1.44e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02534 K25841 - gmx:100802201 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02534 5 838701929 838704088 Vifa5g02534 5 838701929 838704088 ECH