Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02529 ATGAAGAGAGTTGAGATTTCCAACATATTGGCAATGGCTCTAACATTTTTGGCAATAGTGCCAAAGATTGAGTGTCAAGTAAGACCTACTGGACTAACAAATCCACGCCCACTTTGTCCTTCTCAGTTTGCACTAGTAAACTACGCATGTGGAAGGTTACCATTCAGACCGGGGGCACCACCTGGGCCTCCGCCTGCACCTCCATCACCTGATGATGATGGCGGTGATGATGATGGCGGTGACGATGATGGTGCCAATGACGAGGGATACGGAAACAACCACCACGAACACAGGCACAGGCACGGACACGGACACGGTCGCAGACATGGACACAAGCATAGGCATCACCTGACCCAAGAGGAAGAAAATTGTTGCCGATGGGCTAGAGAAGTGGACAGCCAATGTGTTTGCGAACTTCTTGTTCGTTTGCCACCATTCCTGATTAGGCCTTTGCATATCTACACACTCACCATTGGTGAAGACTGTCAAATCACTTACTCCTGTGGTGGCCCAATCTGA 519 0.4952 MKRVEISNILAMALTFLAIVPKIECQVRPTGLTNPRPLCPSQFALVNYACGRLPFRPGAPPGPPPAPPSPDDDGGDDDGGDDDGANDEGYGNNHHEHRHRHGHGHGRRHGHKHRHHLTQEEENCCRWAREVDSQCVCELLVRLPPFLIRPLHIYTLTIGEDCQITYSCGGPI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02529 172 MobiDBLite consensus disorder prediction 96 114 - -
Vifa5g02529 172 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 58 170 - -
Vifa5g02529 172 MobiDBLite consensus disorder prediction 56 70 - -
Vifa5g02529 172 MobiDBLite consensus disorder prediction 55 115 - -
Vifa5g02529 172 MobiDBLite consensus disorder prediction 71 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02529 Vifa-Chr5 837431927 837432445 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02529 - - gmx:102669806 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02529 5 837431927 837432445 Vifa3g01456 3 382153737 382154231 PCT