Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02525 ATGGCGTCTCTGGCTGATGTTTGTTATTCTGCAGCCATCAATCTGACGTCTGCAATTATATTCCTTCTGGCGTTCGCAGTGTTGCGAATTCAGCCTTTTAATGATAGGGTCTACTTCCCAAAATGGTATCTCAAAGGGATAAGATCCAGCCCAACAAATTCCAGATCAATTGTCAAGAAATTTGTCAACCTTGACTTTGGGACCTACATTAGGTTCCTCAATTGGATGCCTGCAGCATTGCATATGCCTGAGCCTGAGCTTATTGATCATGCAGGCCTTGATTCTGCCGTTTTTATTCGGATTTATGTCCTCGGTGTCAAAATATTTGCCCCAATTACGCTACTGGCTTTTATGGTTTTGGTTCCTATAAACTGGACTGGAAAAACTTTGAATGCACCAGCAGCCAAGAATTTGACATTTAGCAATATTGACAAGCTTTCAATATCCAACATTCCATTTGGATCAAAGAGGTTTTGGGTGCATATTGGTATGTCATATGTCTTCTCAGCTTGGACATGTTATAGCCTTTATAAGGAATATATGATTGTTGCGTCAATGAGACTGCATTTTTTGGCATCTGAACGTCGTCGTCCAGATCAATTTACTGTCTTGGTGAGGAATGTTCCCCCGGATATGGACGAATCAGTCAGTGAACACATTGAACATTTTTTTTGCGTCAACCATCCTGATCACTATTTGATGCATCAAGTTGTTTATAATGCAAACGCGCTTGCATCAATAGTTGAACAGAAGAAGAAATTGCAAAACTATTATGTTTACTATCATAACAAATATGAAAGAGACCCTTCAAAGAGACCAACTACTCGGACAGGTATGATGGGTCTCTTGGGGACTAAAATTGATGCCATTGATCACTATACTGCATTGATTGAAAAGTTGAGTGAAGAAGAAGCTGAAGAAAGAGAAAATGTTATGAATGATCCCGATGCTATTATCCCTGCAGCATTTGTATCTTTCAAAACCCGATGGGGGGCGGCTGTGTGCGCTCAAACTCAACAAACTAGTGATCCTACCGTGTGGCTGACAGAATGGGCTCCTGAGCCTAGGGATGTCTACTGGGAGAATCTTGCAATTCCATATTTTGACCTGAATCTTAGAAGATTACTCACTACTGTCTCTTTGTTTTTCCTTGTTTTCTTCTTTATGATACCTATAGCCTTTGTCCAATCTCTAGCTAACATTGAGTCAATCGAGAAGGTCCTTCCTTTCTTGAAATCAGTAATTGAAAAGCCATCTGTAAAGTCTGTTATTCAAGGATTTCTTCCAGGGCTAGCATTGAAGTTATTTCTCATAATGCTTCAAAAATTACTCATGACAATGTCCAAAATAGAAGGTTACTCATCGTTTTCCAGTTTGGAACGGAGATCAGCTTCCAAATATTATTTGTTTGTTCTCATCAACGTGTTCCTTGGGAGTATTATAACAGGAACGGCATTTCAGCAACTCCAGACTCTTGTTAATGAACCCTCTTCAGAGTTCACAAAAACTGTTGGCAGTACAATCCCCATGAAAGCTACGTTCTTCATGACATACATTATGATAGACGGGTGGGCTGGAGTATCTGGAGAAATCCTCAGGTTATCTACGTTAATCACGTTCCACCTGAAAAACACATTTTTAGTGAAAACAGAGCAAGACAGACAGAACGCCATGGATCCCGGTAGCTTGGATTTTGCTACATCTGAACCTAGAATCCAGTTATATTTCATGCTGGGGCATGTCTATGCTCCAGTCACACCTTTACTTCTTCCCTTCATTGTAGTCTTCTTTGCTTTTTCCTACTTGGTCTTTCGGCACCAGATTATCAATGTGTATAACCAGCAATATGAGAGTGGAGCAACATTTTGGCCAGATGTCCACCGTCGAGTAATCATCGGCTTGATTATATCTCAAATTCTTTTGATGGGATTGCTTAGTACGAGAGGGGCAAATAAGTCGACACTATTGCTTATTGCGCAACCTGTCTTGACAATCTGGTTCCACAGATATTGCAAAGGGCGCTTCGAAACTGCATTCGTAAAGTTCCCACTAGAGGATGCCATGGTGAAGGATACACTTGAAAGGGCTGTTGAACCAAACTTGAACCTTAGACTTTATCTTGAGGATGCATACGTACACCCAGTTTTTAAGAGCGACGAGCTCGAGAAATCTGTGATAGTTGACGATGAAGAGGAGAATCCTCTTATTCAAACAAGAAGAACTTGTCGGAGTAGCAAGCCAGAATCTGAAAATGAATCTGCCAGTATCTGA 2271 0.4073 MASLADVCYSAAINLTSAIIFLLAFAVLRIQPFNDRVYFPKWYLKGIRSSPTNSRSIVKKFVNLDFGTYIRFLNWMPAALHMPEPELIDHAGLDSAVFIRIYVLGVKIFAPITLLAFMVLVPINWTGKTLNAPAAKNLTFSNIDKLSISNIPFGSKRFWVHIGMSYVFSAWTCYSLYKEYMIVASMRLHFLASERRRPDQFTVLVRNVPPDMDESVSEHIEHFFCVNHPDHYLMHQVVYNANALASIVEQKKKLQNYYVYYHNKYERDPSKRPTTRTGMMGLLGTKIDAIDHYTALIEKLSEEEAEERENVMNDPDAIIPAAFVSFKTRWGAAVCAQTQQTSDPTVWLTEWAPEPRDVYWENLAIPYFDLNLRRLLTTVSLFFLVFFFMIPIAFVQSLANIESIEKVLPFLKSVIEKPSVKSVIQGFLPGLALKLFLIMLQKLLMTMSKIEGYSSFSSLERRSASKYYLFVLINVFLGSIITGTAFQQLQTLVNEPSSEFTKTVGSTIPMKATFFMTYIMIDGWAGVSGEILRLSTLITFHLKNTFLVKTEQDRQNAMDPGSLDFATSEPRIQLYFMLGHVYAPVTPLLLPFIVVFFAFSYLVFRHQIINVYNQQYESGATFWPDVHRRVIIGLIISQILLMGLLSTRGANKSTLLLIAQPVLTIWFHRYCKGRFETAFVKFPLEDAMVKDTLERAVEPNLNLRLYLEDAYVHPVFKSDELEKSVIVDDEEENPLIQTRRTCRSSKPESENESASI 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02525 756 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 9 725 IPR045122 GO:0005227
Vifa5g02525 756 MobiDBLite consensus disorder prediction 736 756 - -
Vifa5g02525 756 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Vifa5g02525 756 Coils Coil 290 310 - -
Vifa5g02525 756 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
Vifa5g02525 756 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02525 Vifa-Chr5 836135922 836141803 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02525 K21989 - gmx:100776693 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02525 5 836135922 836141803 Vifa5g02525 5 836135922 836141803 ECH