Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02493 ATGGCAAAATCTTCATCATTCTCCATAACATTTTTCATCTCTATAATATCCTTTGCCACTGCCACTAAATACTATCAAAGCCTGTCCCCAACAATGTTAGGTTTTCAAGAGGAAAAATTCACCCACCTTCACTTTTACTTTCACGACATCGTCACCGGCCCAAAACCGAGCATGGTATTTGTAGCCGAACCTAATGGCAAGGCAAAAAATGCCTTGCCATTCGGGACAGTTGTGGCGATGGACGATCCGTTAACGGCCGGACCCGAACGTGACTCAAAACTTGTAGGCAAGGCCCAAGGAATTTACACTTCTATATCACAAGAAGAGATGGGACTAATGATGGTGATGACTATGGCGTTTTCGAATGGAGAATTTAATGGAAGCACACTTAGCATATTAGGGAGGAACATGATCATGAGTGAGCCTGTTAGAGAAATGGCCATTGTTGGTGGGACTGGAGCTTTTCGTTTTGTTCGTGGATATGCTCAGGCTAAGTTTTTTTCTGTTGATTTCACCACGGGAGATGCTGTTGTGGAATATGACATATTTGTATTCCATTATTAA 564 0.4238 MAKSSSFSITFFISIISFATATKYYQSLSPTMLGFQEEKFTHLHFYFHDIVTGPKPSMVFVAEPNGKAKNALPFGTVVAMDDPLTAGPERDSKLVGKAQGIYTSISQEEMGLMMVMTMAFSNGEFNGSTLSILGRNMIMSEPVREMAIVGGTGAFRFVRGYAQAKFFSVDFTTGDAVVEYDIFVFHY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02493 187 PANTHER NUCLEOPORIN-RELATED 24 183 IPR004265 -
Vifa5g02493 187 Pfam Dirigent-like protein 41 185 IPR004265 -
Vifa5g02493 187 Gene3D - 32 178 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02493 Vifa-Chr5 825465394 825465957 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02493 - K25075 gmx:100817686 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02493 5 825465394 825465957 Vifa5g02493 5 825465394 825465957 ECH