Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02492 ATGTCTGGAAAAGCAACAGCCTCGAGTCATAATATAGGTCTTAGAGGATCTGGTGGTCTTTCACATGCTTACATTCAGTACCCACCGCTTCGATGTAATGTTCCTGGATCAAGGGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCCCCAACTGCTGACCAGGTCTTTTCATGGAAAGTCAGTCTCTTTGATCCTCTCATTGGTCCCACCACTGACTCAATAAGTGAAGGCCCTATTATAGCTATTCGGTATTCTTTAGACACAAAGGTTATAGCAATTCAGCGATCGGGCCATGAGATACAATTTTGGGATAGAGAAACTGCAGAAACGTTTAGCCATAAGTGCAGGGCAGAATCAGAAAGTATACTTGGATTTTTTTGGACAGACAGTCAACAATGTGATATTGTTATCGTTAAGACCACTGGTCTAGACTTGTGTGCATATAAGTCAGAGTCAAAATCACTCCAATTAGTGGAAACAAAGAAACTGAATGTTAGTTGGTATGTTTACACACATGAAAGCCGCCTGGTTCTTCTTGCTTCTGGAATGCAGTGCAAGACATTCCATGGATTTCAGATTTCGTCTGCAGATGTTGTTCGCTTACCACGGTTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCCGTATTAGCAGCTGAAGACATCTTTATTGTTACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCAATGCTACTCCATTCCTATAGGCTATATCGTGATGCAGTGATACAGCAGGGATCTTTACCAATTTATTCCAGCAGGATTGCTATTCTCGAGCACCAATATCTGCACCACTTCCTTTATTTTACATATACCGATACATGGAATTTCCTAGTCCCTGATCTCGTGTGCGATGTGGCCAATAAGCTATTATGGAAATTCAATTTAGACTTAGAAGCAATTTCTGCCAGTAACTCAGATGTCCCATCAGTATTAGACTTCCTGCAGCGGCGAAAGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATAACGCAGACACTTATTCTAGAGCACAGACCTGTGCATGTGGTTGCCAAGGCTATAAATGTACTAGTTACCTCGTACTGCCATTCAATTAAAACTTGTAGCTTATTGAAGGGGCTGAAACCAGAGATGACATTAAACTCTGGTGCACAAAATGCTGACGCTGATGTATCTGCTATAGAAAGTGATGCAGTTGGGAAATCGATCGTACATGAATCTACCACTAGAGTTGACAGTGGAACTTTGGATTCTGAGGATGAATCACAGTTTGCAAATCTTAAACACAGTTCAAAGGAGGCCCTTGTTGGGGGTAGTGTAAACAATGTGAACTCCCCTCGTAACGAAGCTCATAGTTCTTATGCTATGCAATCATCTTTATTTTCTGCTCAAGAGGATTCCCAACTTACTTCAGCAGCAATTTCACCTGATGAGATGTACAACTTTGTCTTTTCTCCCGTTGATGAAGAGATGGTGGGCGATCCTTCTTACTTGGTTGCTATAATTATTGAGTTTCTTCACAGTGCAAATTTGGAAAAGATTCGTGTGGCCCCAAATCTATATGTATTGATAATTCAACTTCTGGTGCGGAATGAACGTTATGCTGAGTTGGGGTTGTTTGTCGTAAATAAGATTTTGGAGCCTTCTAAGGAAGTTGCACTGCAACTCCTGGAGTCTGGACGTCAGAACACCCAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAGCTTGGCTTACATAATGATTATGTATTGCTGCTAGTGCAAGATGGATACTACCTTGAAGCCCTGCGATATGCACGGAAGTACAAGGTGGATACCATCCGACCGTCATTGTTTTTAGAAGCAGCTTTTGTATCCAATGACTCCCAACATCTTGCTGCAGTTCTAAGATTCTTTACAGATTTCCTTCCTAGCTTCAAAAACACCTCAGAGCATAATAGATACTACCGCATACTAAATGAGATGAACTCTTCCATGACTGTTTAA 2022 0.4125 MSGKATASSHNIGLRGSGGLSHAYIQYPPLRCNVPGSRGLFYDDGNKLLLSPTADQVFSWKVSLFDPLIGPTTDSISEGPIIAIRYSLDTKVIAIQRSGHEIQFWDRETAETFSHKCRAESESILGFFWTDSQQCDIVIVKTTGLDLCAYKSESKSLQLVETKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADVVRLPRFEMVMAKSEANSKPVLAAEDIFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAILEHQYLHHFLYFTYTDTWNFLVPDLVCDVANKLLWKFNLDLEAISASNSDVPSVLDFLQRRKLEANKAKQLCLGITQTLILEHRPVHVVAKAINVLVTSYCHSIKTCSLLKGLKPEMTLNSGAQNADADVSAIESDAVGKSIVHESTTRVDSGTLDSEDESQFANLKHSSKEALVGGSVNNVNSPRNEAHSSYAMQSSLFSAQEDSQLTSAAISPDEMYNFVFSPVDEEMVGDPSYLVAIIIEFLHSANLEKIRVAPNLYVLIIQLLVRNERYAELGLFVVNKILEPSKEVALQLLESGRQNTQTRKLGLDMLRQLGLHNDYVLLLVQDGYYLEALRYARKYKVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPSFKNTSEHNRYYRILNEMNSSMTV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02492 673 Pfam Colon cancer-associated protein Mic1-like 506 646 IPR009755 -
Vifa5g02492 673 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 286 668 IPR040371 GO:0010506|GO:0035658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02492 Vifa-Chr5 824605327 824614277 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02492 K24763 - cave:132161895 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02492 5 824605327 824614277 Vifa5g02492 5 824605327 824614277 ECH