Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02491 ATGGCGTCGAAACAAGGTGTGAAATCGAAACGATTTGGTTCGATTGGTGCAAAAGGTGTGAATTCGCCTTCTTCTTCGACGACGTCGTCTTCTAAACAGTTTCAGGAAACCTCTAATGATGCTCCGAGCTCGCCGGCGTCTTCGTCCGTGCGGAGTAAGCCGCAGCAGTTTTATCCAGAAACTGTGCCTTTGGAGGCTCAGAAAACTAAAGAAAATGTTACTGTGACGGTGCGGTTTCGGCCTTTGAATCCTAGGGAAATTCGTCATGGCGAGGAGATTGCTTGGTATGCAGATGGAGATACAGTAGTGCGAAATGAGTATAATCCATCCATAGCATATGCTTACGATCGTGTTTTTGGTCCCACGACCACAACTCGTCATGTCTACGATGTTGCCGCTCAGCATGTTGTTAGTGGTGCTATGGAGGGCATCAATGGAACAGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCTCTTGCCGTGAAGGATACTTTTAGCATTATCCAAGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCGTACTTGGAGATCTACAATGAGGTAGTTAATGACTTATTAAATCCAGCTGGACAGAACTTAAGAGTCAGAGAGGATGCTCAGGGCACTTTTGTTGAGGGAATTAAGGAAGAGGTTGTGCTCTCCCCTGCTCATGCACTCTCTCTTATTGCAGCTGGAGAAGAACACAGACATGTTGGGTCCACAAACCTCAACTTACTCAGCAGCAGGAGCCATACAATATTTACTCTGACCATAGAAAGCAGTCCATGTGGTGAATATATTGAAGGAGAAGCGGTAACACTGTCACAATTGAACCTCATTGATCTAGCAGGTTCAGAGAGTTCAAAAGCTGAAACAATTGGCATGAGAAGGAGAGAAGGATCATATATCAACAAAAGTCTTTTAACTCTTGGAACTGTTATTTCAAAATTGACCGAAGCTAAAGCTAGTCACATACCATATAGGGACTCCAAATTGACTAGAGTGCTTCAGTCTTCTCTCAGTGGTCATGGACGTGTATCTCTTATTTGCACAGTAACCCCTTCATCAAGTAGCAGCGAAGAGACACATAATACATTGAAGTTTGCTCACCGGGCAAAGCATATTGAAATACAAACAGCACAAAATAAGATAATTGATGAAAAGTCGCTCATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAATTGGAACAGTTAAAGAAGGGCATTGTCCCAGTTCAGCCAAAAGACACTGGGGATGATGACATTGTGCTCCTAAAGCAAAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCAGATTGGAACAAGAAGAAGAAGCTAAGGCTGCTTTGTTAGGCCGAATACAACGGTTGACTAAGTTGATTTTGGTCTCCACAAAAGCATCACATTCAACGAGATTTCCTAACAGGCCTGGTCACCGTAGAAGACATTCCTTTGGAGAAGAAGAGCTGGCATATCTTCCATACAAAAGGCGGGATTTAATCTTAGAAGAGGAAAATATTGACTTGTATGTTAATCTGGAGGGAAATGCTGCAACAGCTGATGATTCTCCAAAAGAGGAGAAAAAGACAAAGAAACATGGACTACTAAATTGGTTGAAACCACGTAAACGGGAAAGTGCCTTGACAGGCACTAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCGTCTACACCTCAAGCAGACAATGGTAACCATGTGGAGTCCAGACTTTCCCATTCTCTAGCCGCAGAAAGCTCTCCATCTGCTGATCATATATCCGAGGCAAGAGAGGATAAAGATATTCGTGACGATAGTTTATTGGGACAAGAGACACCTTTGACAAGCATGAAATCAGTTGATCAAATTGATCTTCTGAGGGAGCAGCACAAGATTTTATCCGGAGAAGTTGCACTTCATTCAAGTGCATTAAAAAGGCTGTCTGAGGAAACAAGAATAAATCCTCAAAATAGTCAGATTCATGTGGAGATGAAAAGGTTGAAAGACGAAATCAAGGAAAAGACTGACCAAATAGATTTGCTGGAAAAGCAAATGTCTAATTATTTCATTGCTTCAGACCAGACAGATCAATCAGGAGTATCGCAGGCTGTTGCTGAGCTGATGGAACAATTAAATGATAAATCCTTTGAACTTGAGGTCAAAGCAGCAGACAATCGTATAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGCGAAAGCCTGCAAGAAACAGTTGCTTCTTTGAAACAGCAACTGGTAGATGCAATAGAGTTGACGAATTTCAGCCCAGCCAATCATTCACAACATTTCCTTGGAACCAAGGACTATCATGGTGAACTTCACCATGACAAAGGAAATATAAACAATACCAATGAAGGGATTCTTTTGCAAGCACAGGTGAATGAGATAGAAGAGCTGAAGCAGAAGGTGGCACAGCTAACAGAATCAAAAGACCAGCTCGAAGTTAGGAATCAGAAACTAGCAGAAGAGAGTTCATATGCTAAAGGACTAGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCTAAACTCATGAACCACAATGAGAGATTAGCTGCTGAGCTAGCCGCGTCCAAGAATTCATCTACCCCACGGAGAACTAGTGGAGCAGCCCAAAACGGGAGAAGAGAAAGTCAAGTTAGACCTAGACGAAATGATCAGGGTGGTTCAAACTCAGATGTCAAGAGAGAACTAGCCTTGAGTAAAGATCGGGAACTTTCATATGAAGCTGCTCTTTTAGAGAAAGATCAGAAAGAGGCCGATCTTCAAAGAAAGGTAGAGGAATCAAAACAAAGAGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTTCTTGTGGCAAAGCTAAAAAAGTCACATGGAGCAGAAAATGATGTTTCAGGTTCGACTAGAGAGAGTTCGCTACTGGATGGTTTTGACATTTGA 3024 0.4223 MASKQGVKSKRFGSIGAKGVNSPSSSTTSSSKQFQETSNDAPSSPASSSVRSKPQQFYPETVPLEAQKTKENVTVTVRFRPLNPREIRHGEEIAWYADGDTVVRNEYNPSIAYAYDRVFGPTTTTRHVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDTFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRVREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNLNLLSSRSHTIFTLTIESSPCGEYIEGEAVTLSQLNLIDLAGSESSKAETIGMRRREGSYINKSLLTLGTVISKLTEAKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSSEETHNTLKFAHRAKHIEIQTAQNKIIDEKSLIKKYQQEIQCLKEELEQLKKGIVPVQPKDTGDDDIVLLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTKASHSTRFPNRPGHRRRHSFGEEELAYLPYKRRDLILEEENIDLYVNLEGNAATADDSPKEEKKTKKHGLLNWLKPRKRESALTGTSDKSSGAKSTSTPSTPQADNGNHVESRLSHSLAAESSPSADHISEAREDKDIRDDSLLGQETPLTSMKSVDQIDLLREQHKILSGEVALHSSALKRLSEETRINPQNSQIHVEMKRLKDEIKEKTDQIDLLEKQMSNYFIASDQTDQSGVSQAVAELMEQLNDKSFELEVKAADNRIIQEQLNQKICECESLQETVASLKQQLVDAIELTNFSPANHSQHFLGTKDYHGELHHDKGNINNTNEGILLQAQVNEIEELKQKVAQLTESKDQLEVRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNERLAAELAASKNSSTPRRTSGAAQNGRRESQVRPRRNDQGGSNSDVKRELALSKDRELSYEAALLEKDQKEADLQRKVEESKQREAYLENELANMWVLVAKLKKSHGAENDVSGSTRESSLLDGFDI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 909 932 - -
Vifa5g02491 1007 Coils Coil 445 479 - -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 887 907 - -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 539 553 - -
Vifa5g02491 1007 Pfam Kinesin motor domain 78 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 537 634 - -
Vifa5g02491 1007 Coils Coil 866 893 - -
Vifa5g02491 1007 Coils Coil 677 704 - -
Vifa5g02491 1007 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vifa5g02491 1007 Coils Coil 817 851 - -
Vifa5g02491 1007 CDD KISc_CENP_E 72 391 - -
Vifa5g02491 1007 ProSiteProfiles Kinesin motor domain profile. 72 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02491 1007 Coils Coil 745 779 - -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 986 1007 - -
Vifa5g02491 1007 PANTHER CENTROMERE PROTEIN E 70 988 IPR027640 GO:0003777|GO:0007018
Vifa5g02491 1007 SMART kinesin_4 70 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02491 1007 Coils Coil 940 971 - -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 569 608 - -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 611 627 - -
Vifa5g02491 1007 Coils Coil 393 427 - -
Vifa5g02491 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 426 IPR027417 -
Vifa5g02491 1007 Gene3D Kinesin motor domain 63 422 IPR036961 -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 18 56 - -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 1 65 - -
Vifa5g02491 1007 MobiDBLite consensus disorder prediction 887 932 - -
Vifa5g02491 1007 FunFam Kinesin-like protein KIN-7G 64 422 - -
Vifa5g02491 1007 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02491 1007 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02491 1007 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02491 1007 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02491 Vifa-Chr5 823540953 823565343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02491 1 723 Miscellaneous Gene Families AT5G06670 69.315 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02491 K11498 - gmx:100815027 1660.2