Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02484 ATGTCCCATCCCCACCACCGTACAACAACCACATTCGCGCGCGATTCCTCTGTTTTTGATTCATTCCGTTACCACAGCACCACCACCGTAATGACGCACAAACAACGCTTCAAGCGAGTCGCAAAACCCATTTTACACCTTCCACGAATCAAACCCGCACGTAAAACGCGACTTTCCAAATCACTCAAACTCACCGCTCCTGAATCCAACCCATCATCAGAACCGCACATTTCATTCGAAAAAACAAAACCTTTACCCCGCGAGTTCTTCCAAATCGATGCACTAGACCTTGCTCCTCGTTTACTCGGAAAATTTCTTCGCAGAGACGACGTCGTTCTTCAGATTACCGAGGTAGAAGCATATAGATCAAATGATTCAGCTAGTCATGCTCGGTTTGGTATTACTCCAAGAACTGCTCCTCTTTTTGGACCGGGTGGACACGCATATGTCTATCTTTGCTATGGACTCCACGTGATGCTGAATGTTGTTGCTGATAAGGAAGGAGCTGGAGCTGGAGCTGGTGTTTTGATACGTTCTTGTGCCCCCGTTTGTGGATTGGATGTTATTCAACAACGGCGAGGTCAAAAAACGGATAAACCTATACTTCTTACAGGTCCTGGTAAGGTTGGTCAGGCTCTAGGTCTTTCAACTGAATGGTCAAATCATCCCCTTTATACCCCTGGTGGTTTAGAACTCTTAGATGCTCCGGAGCATGAAAACATATTGGTAGGTCCACGTGTTGGTATCCAGTACGCACTGCCAGAGCATGTCGACGCACTGTGGAGATTTGCCATTGCAGGTTCCGCTTGGATTAGTGCTCCAAGAAACACTCTCAGGCCACCGTTTTAG 849 0.4723 MSHPHHRTTTTFARDSSVFDSFRYHSTTTVMTHKQRFKRVAKPILHLPRIKPARKTRLSKSLKLTAPESNPSSEPHISFEKTKPLPREFFQIDALDLAPRLLGKFLRRDDVVLQITEVEAYRSNDSASHARFGITPRTAPLFGPGGHAYVYLCYGLHVMLNVVADKEGAGAGAGVLIRSCAPVCGLDVIQQRRGQKTDKPILLTGPGKVGQALGLSTEWSNHPLYTPGGLELLDAPEHENILVGPRVGIQYALPEHVDALWRFAIAGSAWISAPRNTLRPPF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02484 282 NCBIfam DNA-3-methyladenine glycosylase 85 272 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vifa5g02484 282 Pfam Methylpurine-DNA glycosylase (MPG) 88 268 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vifa5g02484 282 MobiDBLite consensus disorder prediction 56 78 - -
Vifa5g02484 282 CDD AAG 89 272 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vifa5g02484 282 Gene3D - 80 279 IPR036995 GO:0003677|GO:0003905|GO:0006284
Vifa5g02484 282 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 65 280 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vifa5g02484 282 MobiDBLite consensus disorder prediction 62 77 - -
Vifa5g02484 282 SUPERFAMILY FMT C-terminal domain-like 83 278 IPR011034 GO:0003824
Vifa5g02484 282 FunFam Putative 3-methyladenine DNA glycosylase 80 280 - -
Vifa5g02484 282 Hamap Putative 3-methyladenine DNA glycosylase. 87 272 IPR003180 GO:0003677|GO:0003905|GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02484 K03652 - gmx:100813424 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02484 5 821766525 821769071 Vifa5g02484 5 821766525 821769071 ECH