Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02472 ATGATGGTGAAATCTATCCAGCTTCAGCTATGCGGGTTTGTCACCCAACGTTGGTCTCTAAAACCTCGAACCTCCCTTTCATTCTCATCACTATCATCACTTCCCCCAATTTCAAACCCTAACCCTAACCCTTCTTTCAAACTCCTCCCCACCCCTCGCATCACTCGATTCACACCGTTTCGTGCTTCATCATCGCTTCAATCCTCTGGAAATGTTCGAAGTATCAAGTTCTGTCAGTGGTGTGGTGGTTCAACTAAACATGATATACCTGATGGTGAAGAAAAATTGAGAGCCATATGTACAGTTTGTGACAAGATTGCTTATCAAAATCCCAAAATGGTAGTTGGTTGCCTCATTGAACATGAAAATAAAGTCCTCCTTTGCAAGAGGAATATTCAACCTTCTCACGGTCTTTGGACGCTTCCCGCTGGCTATTTGGAAATCGGAGAGTCGGCTATGGAAGGTGCCGTAAGGGAAACAAGGGAGGAAGCAAATGCAGATGTAGAAGTAATTTCTCCCTTTGCTCAATTGGACATTCCTTTAATTGGCCAAACATACATGATATTCTTAGCAAAGCTGAAGAAGCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAACTTTTTTCACTTGATGATATACCTTTTAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTGAATTTGTATGTTGAGGATATCAAGACTGGCAAGCCCAAATTTCATTATGGAACCATTAACAAAAGACCGGGTACAAGTCCTTCTGATATTCGTGCCTACACACTGGATCATCACATGTACACATGA 813 0.4194 MMVKSIQLQLCGFVTQRWSLKPRTSLSFSSLSSLPPISNPNPNPSFKLLPTPRITRFTPFRASSSLQSSGNVRSIKFCQWCGGSTKHDIPDGEEKLRAICTVCDKIAYQNPKMVVGCLIEHENKVLLCKRNIQPSHGLWTLPAGYLEIGESAMEGAVRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKKPHFSPGPESSECQLFSLDDIPFNSLSFSSMVVTLNLYVEDIKTGKPKFHYGTINKRPGTSPSDIRAYTLDHHMYT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02472 270 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 110 261 - -
Vifa5g02472 270 ProSiteProfiles Nudix hydrolase domain profile. 110 233 IPR000086 -
Vifa5g02472 270 Pfam NUDIX domain 114 215 IPR000086 -
Vifa5g02472 270 Pfam Nudix N-terminal 76 109 IPR029401 -
Vifa5g02472 270 SUPERFAMILY Nudix 76 236 IPR015797 -
Vifa5g02472 270 ProSitePatterns Nudix box signature. 144 165 IPR020084 GO:0016787
Vifa5g02472 270 PANTHER NUDIX HYDROLASE 23 77 264 - -
Vifa5g02472 270 Gene3D - 74 109 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02472 K18453 - gmx:100808417 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02472 5 818269593 818273173 Vifa5g02472 5 818269593 818273173 ECH