Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02462 ATGGGAGCTGGTGGCCGAACCTCTGTTCCTCCTTCGAGCAGGAAATCAGAGAATGACACTGTGAAGCGGGTGCCATTTGAAAAGCCTCCATTTAGTCTCGGCCAGATCAAGAAGGCCATTCCACCTCACTGTTTTAAGCGCTCTGTTATCCATTCATTCTCCTATGTTGTTTACGACCTCACCGTAGCCTTCTGCCTCTATTACATTGCCACTCATTATTTCCAGAACCTTCCTCACCCTCTCTCTGTCTTGGCCTGGCCTGCCTACTGGGCTGTCCAAGGTTGCGTCCTTACAGGTGTTTGGGTTGTTGCACATGAGTGTGGCCATCATGCATTCAGTGACTATCAATGGCTTGATGATACAGTTGGCCTTATTCTTCACTCTGCTCTTTTAGTCCCTTATTTTTCATGGAAATACAGCCATCGTCGCCACCATTCAAACACTGGTTCCCTTGAGAAGGATGAAGTCTTTGTGCCCAAACAAAAGTCCAGTATCTATTGGTACTCCAAATACCTCAGCAACAACCCACTAGGAAGAATCCTCACAATTACTATCACACTCACTCTTGGCTGGCCCCTTTACTTGGCGCTCAATGTTTCAGGCAGGCCTTATAAGGGGTTTGCTTGCCACTTTAACCCACATGGTCCCATTTACTCTGATCGTGAACGACTTCAAATATATGTATCAGATGCAGCAATACTTGCAGTATGCTTTGGGCTTTACCATCTTGCATTGGCCAAAGGTCTTGCCTGGGTTGTTTGTGTTTACGGAGTTCCACTGCTCGTAGTCAATGGATTCTTGGTATTGATCACATTCTTGCAGCATACTCACCCTGCATTGCCACATTACGATTCCTCAGAATGGGACTGGTTGAGAGGAGCTTTAGCAACTGTGGACAGGGATTATGGAATCCTAAACAAGGTCTTCCATAATATTACTGACACTCATGTGGCTCATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCTACCAAGGCAATAAAGCCAATTTTGGGAGACTATTATCGGTTGGATGAAACACCATTTTACCAGGCATTATGGAGGGAAGCAAGAGAGTGTATCTATGTTGAGCCAGATCAAGGTACTGAGAAAAAAGGCGTGTTCTGGTACAACAATAAGTGGTGA 1155 0.4554 MGAGGRTSVPPSSRKSENDTVKRVPFEKPPFSLGQIKKAIPPHCFKRSVIHSFSYVVYDLTVAFCLYYIATHYFQNLPHPLSVLAWPAYWAVQGCVLTGVWVVAHECGHHAFSDYQWLDDTVGLILHSALLVPYFSWKYSHRRHHSNTGSLEKDEVFVPKQKSSIYWYSKYLSNNPLGRILTITITLTLGWPLYLALNVSGRPYKGFACHFNPHGPIYSDRERLQIYVSDAAILAVCFGLYHLALAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGDYYRLDETPFYQALWREARECIYVEPDQGTEKKGVFWYNNKW 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02462 384 MobiDBLite consensus disorder prediction 1 26 - -
Vifa5g02462 384 Pfam Fatty acid desaturase 85 346 IPR005804 GO:0006629
Vifa5g02462 384 Pfam Domain of unknown function (DUF3474) 25 66 IPR021863 GO:0016717
Vifa5g02462 384 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 14 383 IPR012171 GO:0016491
Vifa5g02462 384 CDD Delta12-FADS-like 47 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02462 Vifa-Chr5 816103586 816104740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02462 1 383 Lipid Metabolism Gene Families AT3G12120 79.112 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02462 K10256 - gmx:547815 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02462 5 816103586 816104740 Vifa5g02462 5 816103586 816104740 ECH