Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02461 ATGCAGGGAGCAAAGAAAGCCGGAGAGACCATTAAGGAAACAGCTGCCAACATTGGTGCTTCTGCCAAATCTGGCATGGAGAAGACCAAAGCAACCGTTCAAGAAAAGACGGAGAAGATGAGCGCACGTGATCCTGTACAAAAAGAGGCCGCAACCCAAAAGAAAGAGGCAAAGCAGAACCAGGCAGAGCTAGATAAGCAGATGGCGCGTGAACACAACGCGGAAGTTAAAGAATCTACCACGGCAGCCCAAATGGGCCAGGCCCACCACAACACGGGGACTGGAACCACCACATACCCTACCACGGGGACTTATGGACAGCCCATGGAGGGCCACTATAGCACGGGGACTGGAACCGGAACCGGGACATACTCTACGACAGGAAATCATGAACATCACACTGGGGCCCATGAGGTGTCAGCCATACCTGGACATCCGAGTGACCATGTGAGAGAGGGAGTCGTGGGCACGCACACTATTGGTACCCATAGAAGCACAGACGGGACTGCTACGGCCCATAATACCCGTGTTGGTGGAAATCCAAATGCCACAGGGTATACAACTGGTGGTACTTACAAGTGA 582 0.5309 MQGAKKAGETIKETAANIGASAKSGMEKTKATVQEKTEKMSARDPVQKEAATQKKEAKQNQAELDKQMAREHNAEVKESTTAAQMGQAHHNTGTGTTTYPTTGTYGQPMEGHYSTGTGTGTGTYSTTGNHEHHTGAHEVSAIPGHPSDHVREGVVGTHTIGTHRSTDGTATAHNTRVGGNPNATGYTTGGTYK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02461 193 MobiDBLite consensus disorder prediction 1 132 - -
Vifa5g02461 193 MobiDBLite consensus disorder prediction 29 77 - -
Vifa5g02461 193 Pfam Late embryogenesis abundant (LEA) group 1 9 77 IPR005513 GO:0009793
Vifa5g02461 193 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 10 130 IPR005513 GO:0009793
Vifa5g02461 193 Coils Coil 47 74 - -
Vifa5g02461 193 MobiDBLite consensus disorder prediction 78 130 - -
Vifa5g02461 193 MobiDBLite consensus disorder prediction 161 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02461 Vifa-Chr5 814657162 814657967 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02461 - - psat:127126235 310.842