Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02411 ATGAAAGTTAATGAAGTGAATGATAATCATTCCATTGATTTGGAGAAAGAGCAAAAAGAAGGGAATGGAGAAGTATCGGACACCGACACGATGAAGGATTCAGTGTCATCTCAGAGTGATTCTTTCACAAATGAAGATGAGAAAGTAGAGAAAGCTTCAAAGGATCCGAAAAGTAAGGTTAAAGGGAATGGTTTAGAAAACAATCGAGGATCGAGGGAGAGTTCTGATAGGAAAACAAATAAATTGCAATCGAAGGTATCGGGTAGCAATCAAAAGAAACCTGTAAACTCAAATAAAGGGCCTTCGAGAGTTGTAAACAAAAATACTTCAACCAATTCTAAGCCGGCGAAAGTTCCCGTTAAAGTTTCTTCAGAATCTTCTGAAGGAGTTGATGAAAAACCTGTTATAGAAGTCAAGGAAATTGGTATTTTGGATGGATCCTCCAGTGGTGCTCAAAGCGTAGGAAGTGAAGATGAAGGTCGTGTTGAAATCGTTAAGGCTGAAGAAAACGGTGAACATGAGAATGCGGCTGCTTTGGAATTGAAAGTTAAAGAAATGGAATCGCGAATTGAAAATCTTGAAGAGGAATTGAGAGAAGTTGCTGCTCTTGAGGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCGGCACACAAAGTGCACACACCTGCTCGGCGACTTTCTAGGCTCTATATACATGCTTGTAAACATTGGACCCCGAAAAGGAAAGCCACGATTGCGAAGAATACTGTTTCTGGCCTTATTTTGGTTGCTAAATCTTGCGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCGAACACCATTGTGCTGAGAGAGATAATTTCACAGGTTTTTGGGAATTCATGTCAAGTTAGTCCCATTATGAGGTTAGCTGGTTCAAATGGGTCTGCCAAGAGAAATGATGGGAAGTCTGCATCACTGAAATGGAAAGGTATCCCAAATGGTAAATCGGGAAATGGTTTTATGCAGATCAGTGAAGATTGGCAAGAGACCGGAACCTTCACATTTGCCTTAGAAAGAGTAGAATCGTGGATTTTTTCTCGGCTAGTAGAGTCAGTGTGGTGGCAGGCTTTGACTCCTCATATGCAATCTTCGGTTGTGGACTTGTGTTCTAATAAATCCATTGGGAGGCTGCTAGGGCCTGCTTTAGGTGATTACAATCAAGGAAGCTTTTCCATCAATCTATGGAGAAACGCTTTCCAAGATGCGTTTCAAAGACTCTGTCCTGTTCGAGCAGGAGGGCACGAGTGTGGTTGTTTGCCGGTGATGGCAAGAATGGTCATGGAACAGTGTGTAGATAGACTAGATGTTGCGATGTTCAATGCCATTCTTCGAGAATCAGCCCATGAGATTCCAACTGATCCTGTATCAGACCCGATTGTGGATTCCAAGGTTTTGCCAATTCCAGCAGGAAACTTAAGCTTCGGATCTGGTGCACAACTGAAAAATTCCGTTGGCAATTGGTCGAGATTGCTCACTGATATGTTTGGCATTGATGCTGAAGATTGTCTAGAAGAATATCACGAGAACGGTGAGAACAACGAAAGGCAGGGCGGAGACGATGAACGTAAATCATTTGCGCTCCTTAACGATTTGAGTGACCTTCTAATGCTCCCAAAAGACATGCTTATAGAGAAACAAGTTAGACATGAGGTATGTCCATCCATCAGTCTTTCATTGATTATACGCGTTCTTTGTAACTTCACTCCAGACGAGTTCTGTCCAGACCCGGTTCCAGGAACTGTCTTGGAGGCCTTGAATGGGGAGACTTTTGTGGAGCGAAGATTGTCGGGAGAATCCATTAGAAGCTTCCCTTATGCTGCGGCTCCAGTTGCATATAGACCTCCCTCTTCAGCCAATGTGGCGGAGAAAGTTGCAGAAGCGGGAGGAAAGTCTCACCTGACAAGAAATGTATCAGTTGTTCAAAGGAGAGGATATACAAGTGATGAAGAACTTGAGGAACTTGAATCACCGATCACATCTATCATTGATAAGGTTCCTTCATCTCCAACAGTTACTACTAATGGAAATGGTAATCACAAAGAGCAAGGGAGTCACACCACAACAAATGCTAGATATCAACTACTTCGTGAGGTTTGGTCCATCTGA 2136 0.426 MKVNEVNDNHSIDLEKEQKEGNGEVSDTDTMKDSVSSQSDSFTNEDEKVEKASKDPKSKVKGNGLENNRGSRESSDRKTNKLQSKVSGSNQKKPVNSNKGPSRVVNKNTSTNSKPAKVPVKVSSESSEGVDEKPVIEVKEIGILDGSSSGAQSVGSEDEGRVEIVKAEENGEHENAAALELKVKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWTPKRKATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQVFGNSCQVSPIMRLAGSNGSAKRNDGKSASLKWKGIPNGKSGNGFMQISEDWQETGTFTFALERVESWIFSRLVESVWWQALTPHMQSSVVDLCSNKSIGRLLGPALGDYNQGSFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVMARMVMEQCVDRLDVAMFNAILRESAHEIPTDPVSDPIVDSKVLPIPAGNLSFGSGAQLKNSVGNWSRLLTDMFGIDAEDCLEEYHENGENNERQGGDDERKSFALLNDLSDLLMLPKDMLIEKQVRHEVCPSISLSLIIRVLCNFTPDEFCPDPVPGTVLEALNGETFVERRLSGESIRSFPYAAAPVAYRPPSSANVAEKVAEAGGKSHLTRNVSVVQRRGYTSDEELEELESPITSIIDKVPSSPTVTTNGNGNHKEQGSHTTTNARYQLLREVWSI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02411 711 MobiDBLite consensus disorder prediction 43 62 - -
Vifa5g02411 711 MobiDBLite consensus disorder prediction 1 27 - -
Vifa5g02411 711 Coils Coil 176 203 - -
Vifa5g02411 711 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 166 709 IPR021827 GO:0005643
Vifa5g02411 711 MobiDBLite consensus disorder prediction 81 120 - -
Vifa5g02411 711 MobiDBLite consensus disorder prediction 675 698 - -
Vifa5g02411 711 MobiDBLite consensus disorder prediction 28 42 - -
Vifa5g02411 711 MobiDBLite consensus disorder prediction 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02411 Vifa-Chr5 794577273 794580018 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02411 - - psat:127126272 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02411 5 794577273 794580018 Vifa5g02411 5 794577273 794580018 ECH