Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02395 ATGGAAGCTGAAATACCAAGTGGAGAAGTGTCTGATGAATATAGTATCAATGATAGTCCCATTGAGCAAGTGAGGCTAACAGTTCCAATCACTGATGACCCTTCTCAGCCAGCACTCACTTTCAGGACTTGGATTCTAGGACTAGCTTCATGTGTGCTCCTTGCATTTGTCAATCAATTCTTAGGCTTCAGAACCAACCCTTTGAAAATCACTTCTGTCTCAGCTCAGATTATTACACTCCCACTTGGGAAACTTATGGCTGCAACACTTCCACCACAGCCAATTCAAGTCCCTTTCACAACCTGGTCTTTTTCGTTGAATCCGGGGCCATTCTCTTTGAAGGAACATGTGTTGATAACCATTTTTGCTAGCTCGGGATCTAGTGGTGTTTATGCAATTAGCATAATCACAATAGTTAAGGCTTTCTATCACAAAAACATACATCCTGTAGCGGCTTATTTGTTAGCGTTATCGACTCAGATGCTAGGGTATGGATGGGCTGGAATTTTCAGAAGGTTCCTTGTTGATTCACCTTACATGTGGTGGCCTGAAAACCTTGTGCAAGTGTCTCTTTTCAGAGCATTTCATGAAAAAGAAACAAGGCCTAAAGGAGGTACTTCTAGGCTGCAATTCTTTTTCATGGTATTTGTGGCTAGCTTTGCATATAACATGGTTCCCGGGTACTTTTTCCAAGCAATGTCAACTGTCTCTTTTGTTTGCTTGATTTGGAAAGATTCTGTCATTGCACAACAGATTGGTTCCGGAATGAAAGGCCTTGGTGTTGGTTCATTCGGCCTTGATTGGAACACGGTTGCTGGCTTCTTAGGTAGTCCTTTGGCTGTACCTGGCTTTGCTATCATCAACATAATGGCTGGATTTTTATTGTATATGTATGTTGTGATTCCAATTGCTTATTGGAACAATTTATATGATGCTCAAAAGTTTCCACTCATCAGCTCTCACACATTTGACTCTAATGGTTCAACATACAACGTTACTCGCATTCTCAATACTAAAACTTTCGACATTGATATGGAAAATTACAACAATTACAGCAAAATCTATATGAGTGTGACGTTTGCGTTCAAATATGGATTGAGCTTCACTGCTCTTACAGCCACTATTTCACACAGTTTCCTCTTCCACGGAGAAATGATTCTACAGATGTGGAAGAAGACAACAAGTTCACTAAAACAACTAGGAGATGTGCATACAAGAATCATGAAGAAAAACTATGAGCAGGTCCCTGACTGGTGGTTTATCACCATTCTGATTCTAATGGTTATGATGGCCTTAGTAGCCTGCGAAGGCTTCGGCAAACAGCTCCAACTTCCATGGTGGGGAGTCTTACTTTCTCTAGCAATTGCATTCTCATCCACCTTACCAATTGGTGTAATTGAAGCAACAACAAACATAAGAACAGGTCTCAATGTGATCACTGAGTTGGTTATCGGTTTCATCTATCCAGGAAAGCCACTAGCAAATGTAGCTTTCAAAACATACGGCCATATCAGCATGGTACAAGCGCTTGGTTTTCTTGGTGACTTCAAATTAGGCCACTATATGAAAATTCCACCAAAATCAATGTTCATGGTGCAGCTTGTAGGCACTGTAGTTGCTTCATCTGTTAACTTTGGAACGGCATGGTGGCTTCTAACATCTATCGAGAATATATGCGATGAATCATTGTTGCCGAAAGGTAGTCCTTGGACATGTCCTGGTGATGATGTGTTTTATAATGCCTCCATCATATGGGGAGTTGTAGGGCCAAAGAGAATGTTTACCAAAGACGGCATTTATCCTGAGATGAATTGGTTTTTCCTTATTGGTCTACTTTCACCTGTTCCGGTGTGGCTTCTTTCTCGCAAATTTCCTAACCTGAAGTGGATTAAACTCATCAACATGCCTACTATCGCTGTAGGTGCATCTGGCATTCCACCGGTGAGATCTGTGAATTATATTAGTTGGGGAATTGTTGGAATATTTTTCAATTTCTATGTTTACAGAAAGTTCAAAGCTTGGTGGGCTAGACATACTTATATTCTTTCAGCTGGTTTAGATGCTGGAGTTGCTTTTATGGGTTTATTACTTTACTTTGCTCTTCAATCTTATGGTATATTTGGTCCATCATGGTGGGGGCTTGAAGCAGATCACTGCCCTTTGGCCAGATGCCCCACAGCTCAAGGTGTACATGCTGAGGGTTGTCCCGTTCCCTGA 2217 0.4127 MEAEIPSGEVSDEYSINDSPIEQVRLTVPITDDPSQPALTFRTWILGLASCVLLAFVNQFLGFRTNPLKITSVSAQIITLPLGKLMAATLPPQPIQVPFTTWSFSLNPGPFSLKEHVLITIFASSGSSGVYAISIITIVKAFYHKNIHPVAAYLLALSTQMLGYGWAGIFRRFLVDSPYMWWPENLVQVSLFRAFHEKETRPKGGTSRLQFFFMVFVASFAYNMVPGYFFQAMSTVSFVCLIWKDSVIAQQIGSGMKGLGVGSFGLDWNTVAGFLGSPLAVPGFAIINIMAGFLLYMYVVIPIAYWNNLYDAQKFPLISSHTFDSNGSTYNVTRILNTKTFDIDMENYNNYSKIYMSVTFAFKYGLSFTALTATISHSFLFHGEMILQMWKKTTSSLKQLGDVHTRIMKKNYEQVPDWWFITILILMVMMALVACEGFGKQLQLPWWGVLLSLAIAFSSTLPIGVIEATTNIRTGLNVITELVIGFIYPGKPLANVAFKTYGHISMVQALGFLGDFKLGHYMKIPPKSMFMVQLVGTVVASSVNFGTAWWLLTSIENICDESLLPKGSPWTCPGDDVFYNASIIWGVVGPKRMFTKDGIYPEMNWFFLIGLLSPVPVWLLSRKFPNLKWIKLINMPTIAVGASGIPPVRSVNYISWGIVGIFFNFYVYRKFKAWWARHTYILSAGLDAGVAFMGLLLYFALQSYGIFGPSWWGLEADHCPLARCPTAQGVHAEGCPVP 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02395 738 Pfam OPT oligopeptide transporter protein 39 700 IPR004813 GO:0035673
Vifa5g02395 738 PANTHER ISP4 LIKE PROTEIN 15 737 IPR004648 GO:0055085
Vifa5g02395 738 NCBIfam OPT family oligopeptide transporter 23 702 IPR004813 GO:0035673
Vifa5g02395 738 NCBIfam small oligopeptide transporter, OPT family 17 702 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02395 Vifa-Chr5 785314129 785316490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02395 17 737 Organic Solute Cotransporters AT4G26590 66.943 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02395 - - gmx:100820498 1310.05