Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02310 ATGGTTCACCACCACCGTAAAAGATCCTCAGACTCCATCAAAGACGAAGAGTCACATATTCATCTCATGGACTGTTCAACCTCTGTATACTACAAGAGAACAAAACCTAAGCTTCTCTCGTTTCTCTTTCTCATCACCTTTCTCTCTTGTTGCTATGTCTTCGCACCTTTCTTCCTTGGACCTTCTTTCTCTCTATCTCTTTTATACTCTAATGGACCTGAAAATGATGCAAACCAAGACGGTGTTGATGTAAAACCTTCTACATGTTCTTCAGTTTCTACCGGAACTATATGTTGTGATAGAACTGGTCATCGTTCTGATATCTGTGTTATGAAAGGTGATATAAGAACAGAATCTTCTTCCTCTTCAATCTTCGTCTACAATTTTTCAAGTGAAAATGTTGATCAAGTTCTTCAACAAGACAAGATTAAGCCGTATACTAGAAAATGGGAGACAAGTGTGATGGACACAATTGATGAATTGAATCTTGTTTCGAAGAAAGTGGATTCGCGGAGAGTTCGAAAATGTGATGTTCAACATGATGTTCCAGCGGTGTTCTTCTCTAATGGAGGATACACTGGGAACGTTTATCACGAATTCAACGATGGAATCATACCTTTGTACATCACTTCACAGCATTTCAACATGAAGGTTGTGTTTGTCATACTTGAATATCATGATTGGTGGATCATGAAATATCGTGATATCCTTTCTCATCTATCTGAATTTCCACCCATTGATTTTAGCAAAGATAACCGGACTCATTGTTTCAATGAAGCAATTGTTGGTCTCAAAATCCACGATGAGCTCGCGGTAGATTCCTCGTTGATGGAAGGTAACAAAAGCATTGTTGATTTCAGAAAGCTTTTGGATAAAGCTTATTTGCCTCGGATTAAAGGACTAATTCGCGAAGAGGGAAGGGAACTACAAGAGAAATCCAAACAACAAAACACAATATCTCCTTTATCCCGATCAGAACCAGAAACCTCACAAGGAGTGGAAGAAATTGCGCGGCCAAAACCGAAGCTAGTTATTGTCTCTAGAAGTGGTTCAAGAGCTATAACAAATGAGAATTTGCTAGTGAAAATGGCTGAAGAAATCGGATTTCATGTCGCGGTTTTAAAGCCTAAAAAAACTTCGGAGTTGGCAAAGATTTATAAGGTACTTAATGAAAGTGATGTGATGATTGGTGTTCATGGAGCTGCAATGACACATTTTATGTTCATGAAACCTAAATCTGTGTTCATTCAAGTTGTTCCTCTTGGTACTAATTGGGCTGCAGATACTTACTATGGTGAACCTGCAAGGAAACTTGGTTTGAAATATATTGGATATGAAATTCATCCTAAAGAAAGCTCTTTGTATGACAAGTATGATAAAAATGATCCTATTTTGAGTGATCCTGATAGCATTACCAACAAAGGGTGGGAATATACAAAGAAGATTTATCTTGATAGCCAAAATGTTAAATTAGACCTCAGAAGATTCAGAAAAAGGTTGCATAGAGCTTATGAGTACACAGTTTTGAGATTGAATTTGAATCTTCAACACCAATCACAGTGA 1563 0.3756 MVHHHRKRSSDSIKDEESHIHLMDCSTSVYYKRTKPKLLSFLFLITFLSCCYVFAPFFLGPSFSLSLLYSNGPENDANQDGVDVKPSTCSSVSTGTICCDRTGHRSDICVMKGDIRTESSSSSIFVYNFSSENVDQVLQQDKIKPYTRKWETSVMDTIDELNLVSKKVDSRRVRKCDVQHDVPAVFFSNGGYTGNVYHEFNDGIIPLYITSQHFNMKVVFVILEYHDWWIMKYRDILSHLSEFPPIDFSKDNRTHCFNEAIVGLKIHDELAVDSSLMEGNKSIVDFRKLLDKAYLPRIKGLIREEGRELQEKSKQQNTISPLSRSEPETSQGVEEIARPKPKLVIVSRSGSRAITNENLLVKMAEEIGFHVAVLKPKKTSELAKIYKVLNESDVMIGVHGAAMTHFMFMKPKSVFIQVVPLGTNWAADTYYGEPARKLGLKYIGYEIHPKESSLYDKYDKNDPILSDPDSITNKGWEYTKKIYLDSQNVKLDLRRFRKRLHRAYEYTVLRLNLNLQHQSQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02310 520 Pfam Glycosyltransferase 61 264 415 IPR007657 GO:0016757
Vifa5g02310 520 MobiDBLite consensus disorder prediction 313 330 - -
Vifa5g02310 520 PANTHER GLYCOSYLTRANSFERASE 38 508 IPR007657 GO:0016757
Vifa5g02310 520 MobiDBLite consensus disorder prediction 306 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02310 Vifa-Chr5 758051806 758053456 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02310 - - gmx:100800591 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02310 5 758051806 758053456 Vifa5g02310 5 758051806 758053456 ECH