Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02274 ATGGCCGTTATGAGTGGTTTCAGGCTTCTATCTTCCAAATCGAGGATTATGCTGATTATAGAAGATCTCTGTACGGTGAGATTAACGCATAAGGCTCTTCTCGTTGATGCTGTTGGGACTCTTGTTCTTCCTTCTCAACCTATGGCTCAGATATATAGAAAGATTCCTTGGGGTAAATCTCGTCTCAGATATGTTAATGATGGTAGACCTTTCTGGCAATACATAGTTAGTAATTCTACCGGATGTGATGATTCTCAATACTTTGAGGAACTTTATAACTACTATGTGACAGACAAGGCATGGCACCTATGTGACCCTAATGCAGGAGAAGTGTTCAAAGCTCTTAGAAAATCAGGTGTGAAATTGGCTGTTGTGTCAAATTTTGACACTCGGTTAAGACCTCTCCTGCGGGCATTAAACTGTGATGATTGGTTTGATGCTGTAGCAGTATCAGCTGAGGTTGCAGCAGAGAAACCAAATCCAACTATATTTCTTAAAGCGTGCGAACTATTGGATGTAAAACCTGAGGATGCTGTTCATGCTGTGATGCCTGGCTTTGGGGAAGTGATGTTCACTTCTTTTAAGGAGGTAGCACAGAGGATCGGGGTCCAGTCTGAAAAAGTATTTCATATGCAAATAAGTTGA 645 0.414 MAVMSGFRLLSSKSRIMLIIEDLCTVRLTHKALLVDAVGTLVLPSQPMAQIYRKIPWGKSRLRYVNDGRPFWQYIVSNSTGCDDSQYFEELYNYYVTDKAWHLCDPNAGEVFKALRKSGVKLAVVSNFDTRLRPLLRALNCDDWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHAVMPGFGEVMFTSFKEVAQRIGVQSEKVFHMQIS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02274 214 Gene3D - 28 181 IPR023214 -
Vifa5g02274 214 PANTHER - 21 55 - -
Vifa5g02274 214 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 145 161 IPR006439 -
Vifa5g02274 214 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 30 41 IPR006439 -
Vifa5g02274 214 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 115 128 IPR006439 -
Vifa5g02274 214 SUPERFAMILY HAD-like 31 180 IPR036412 -
Vifa5g02274 214 Pfam Haloacid dehalogenase-like hydrolase 89 179 IPR041492 -
Vifa5g02274 214 NCBIfam HAD-IA family hydrolase 116 176 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02274 Vifa-Chr5 747891923 747895147 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02274 - - dcr:108193026 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02274 5 747891923 747895147 Vifa5g02274 5 747891923 747895147 ECH