Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02270 ATGAACTCCATGGACCACCTCCATGCTGCTCAGTTACTCCATGTCACCGGAGCCGTCGGCCCGGAGAGTCTTGTTTTTGATAGTCGCGGTGAAGGACCGTACACCGGTGTTGCTGATGGTCGGGTTCTGAAATGGGAAGGAGAGGAACGGGGTTGGACTGAATTTGCCGTCACAAGTTCCAATAGGTCGGACTGTGTACGTCCATTTGCACCAGAGTTAGAGCATGTTTGTGGGAGGCCACTAGGACTAAAGTTTGATAAGAAAAATGGAGATCTGTACATTGCTGATTCCTACCTTGGCCTCAAAGTAGTAGGACCTGCAGGGGGTCTGGCCACCAAAGTAGCAACAGAAGCTGAAGGACAGCCCTTTCGCTTCACCAATGACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACCGATTCAAGCACGACTTACCAGAGAAGGCAATTTATGGTAATACTTCTTACTGGAGACAAGACTGGACGGTTAATGAAATACGACAAGTCAACAAAAGAAGTAAAGGTCTTATTACGCGACCTTGCTTTTCCCAATGGTGTTGCTTTAAGCAAAGATGGTTCATTTCTTCTGGTAGCTGAAACCTCGACTCACAGGATTCTGAGGCTTTGGCTTCACGGACCTAATGCTGGCCAAGTCGATACTTTTGCTGTTGTTCCAGGTTTTCCAGACAATATAAGGAGAAATTCAGAAGGGCAGTTCTGGGTAGCTTTACATGCCAAAGAAACTCCTTTTGGCAAGTGGGTTTCTTCCAATCTATGGGCTGGTAAAGCATTGTTAAAGCTTGGAAATTTCAAGCAGTTGCATGCATCGGTAGCGAAGAAGCCTCATGCTACAGCTATAAAGTTGAGTGATGAAGGGGAAATATTAGAAGTCTTGGAAGATTGTGAAGGGAAGACCTTGAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGAAAACTTTGGATTGCATCAGTGTTAATGCCTTATATTGGTGTTTATAGTTTATGA 1011 0.4481 MNSMDHLHAAQLLHVTGAVGPESLVFDSRGEGPYTGVADGRVLKWEGEERGWTEFAVTSSNRSDCVRPFAPELEHVCGRPLGLKFDKKNGDLYIADSYLGLKVVGPAGGLATKVATEAEGQPFRFTNDMDISEDEDVIYFTDSSTTYQRRQFMVILLTGDKTGRLMKYDKSTKEVKVLLRDLAFPNGVALSKDGSFLLVAETSTHRILRLWLHGPNAGQVDTFAVVPGFPDNIRRNSEGQFWVALHAKETPFGKWVSSNLWAGKALLKLGNFKQLHASVAKKPHATAIKLSDEGEILEVLEDCEGKTLKFISEVEEKDGKLWIASVLMPYIGVYSL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02270 336 SUPERFAMILY Calcium-dependent phosphotriesterase 6 334 - -
Vifa5g02270 336 Gene3D - 3 336 IPR011042 -
Vifa5g02270 336 PANTHER STRICTOSIDINE SYNTHASE-RELATED 9 329 - -
Vifa5g02270 336 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 5 336 - -
Vifa5g02270 336 Pfam Strictosidine synthase 127 214 IPR018119 GO:0009058|GO:0016844
Vifa5g02270 336 Pfam Strictosidine synthase-like, N-terminal 5 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02270 Vifa-Chr5 747486151 747488556 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02270 - - lang:109348186 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02270 5 747486151 747488556 Vifa5g02270 5 747486151 747488556 ECH