Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02269 ATGGGTTGCTCAGCTTCAAAAACAACAACCATAGTTGCAAACAAAAACCCAGAAGATCCAACAACACCTTCTGTCTCTTTTCAATCTTCATCTTCATCAACTTCTTCATTCTCACCTTCTTATGCTTCACAATACTTCAACTCCTCACCACCTGTTAGAAAAGCTTTGTCACTCACAATGCCTCTTATCCATCACCCTCCAACCAAAAAAGGTGACACACACCATCTTGTTTCCTTAACCTCCACCACCTATGGTTCTCTTCTCTTAATTGACCAAAAAGTCCCTAACTTTACCTCTATTGAACAACCCCATCTCACCAAAACATCTCAAAACGATGAAGAACAATCTCTCTCTCCGGATTCTGTTATCAACACTTGGGAACTCATGGATGGTTTGGATGAACATGAAGATTCTCATAATGTTCATAAAGCTTTAATCTTTGACAACCCAGTGAGTTTTTCAGATAAACACAGTTCATGCAGGTACACAGCCTTTGATGGGTCTGCAAAAAAGAAACTTCTTGATTCATTTCAATCATTGAAAGCTTCAGAAGCAGTAATGGAAGAGAAAAGTTCCAAATCTTTTGTGAAGAAACCACTTTGGAAGCATTTATCAGAAGAAGCTTTGTTAGCTAAGTTGGATCCAAGTGTTGCTTGGAGTTACAGAAGAGCATTGTCATCAAGACAACTACTAGGTTGCAACAACAACAACAACAACAACAACAGGTTAAGATGTGTAAGATCAATGGAATCAAGTCCTATGAACCCTTCTTGTTCATCTTTGTTTGGTAAAAGTTTGTGCCTGCTACCTGGAACAGAAGACAGAATAGTTGTTTACAGCACAAGTTTGCGAGGGATTCGAAAGACTTACGAAGATTGTTGTTCGGTGCGAATGATTTTGAGAGGATTTAGAGTCGCGGTCGATGAAAGAGACATTTCTATGGATTCATCCTACAGAAAGGAGTTACAGAATGCACTTGATGGAAAATCAGTAGTGACATTGCCACAGGTGTTTATCAGAGGGAAACATGTTGGAAATGCGGAGGATTTGAAGCAATTGAATGAGTCTGGTGAATTGGCGAAACTGTTGAATGGTTTTCCAACTCAAGATCTTTGGTTTGTTTGTGATAAATGCGGTGATGCGAGGTTTGTGCCTTGTCATAATTGCAATGGTAGCAGGAAAGTGTTTGAGGAAGAACAAGGGAAGTTGAAAAGGTGTGTTCATTGTAATGAGAATGGATTGATCAGATGCACAAGTTGTTGTTCATGA 1269 0.3932 MGCSASKTTTIVANKNPEDPTTPSVSFQSSSSSTSSFSPSYASQYFNSSPPVRKALSLTMPLIHHPPTKKGDTHHLVSLTSTTYGSLLLIDQKVPNFTSIEQPHLTKTSQNDEEQSLSPDSVINTWELMDGLDEHEDSHNVHKALIFDNPVSFSDKHSSCRYTAFDGSAKKKLLDSFQSLKASEAVMEEKSSKSFVKKPLWKHLSEEALLAKLDPSVAWSYRRALSSRQLLGCNNNNNNNNRLRCVRSMESSPMNPSCSSLFGKSLCLLPGTEDRIVVYSTSLRGIRKTYEDCCSVRMILRGFRVAVDERDISMDSSYRKELQNALDGKSVVTLPQVFIRGKHVGNAEDLKQLNESGELAKLLNGFPTQDLWFVCDKCGDARFVPCHNCNGSRKVFEEEQGKLKRCVHCNENGLIRCTSCCS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02269 422 CDD GRX_GRX_like 275 417 - -
Vifa5g02269 422 MobiDBLite consensus disorder prediction 1 36 - -
Vifa5g02269 422 SUPERFAMILY Thioredoxin-like 272 364 IPR036249 -
Vifa5g02269 422 Pfam Glutaredoxin 276 344 IPR002109 -
Vifa5g02269 422 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 73 421 - -
Vifa5g02269 422 Gene3D Glutaredoxin 274 367 - -
Vifa5g02269 422 ProSiteProfiles Glutaredoxin domain profile. 264 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02269 Vifa-Chr5 747079737 747081005 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02269 K17479 - gmx:100811817 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02269 5 747079737 747081005 Vifa5g02269 5 747079737 747081005 ECH