Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02248 ATGGGTGGTAACACATCGGAGGATTTCTCGGTGGTAGTCCTAGCTTCGGATTTCGCCGTAGATGCTCGACCTTTCCTCTTCCACGATGCAGAACAACAACAAGAAGAAGAGAATTGGCACGATTGTTCTCAGTACCTTTCCCCCGACGAAGACTTCTCCGATCTCGAACAATTGCAATTCATTACTCTCCAAGGCTCCGACAAGAACGGCGCTCGCATTCTCCGCATCGTCGGGAAACACTATCCCGCAACAATTGTGAGTGCAGAGCGGCTGAAGAGGTATGTCTTTCACAAAATATTCAGTGAATTGCTAGAAGGGCCATTTTGCATTGTTTACATGCACAGCACTGTTCAAAAGGAGGATAATTCTCCTGGGATGACCATCTTGAGGTGGATCTATGAAGAACTTCCAGATGATTTTAAGGACAGGCTTCAAACTATGTACTTCATCCACCCCGGGCTTCGTTCCAGGCTAGTCATAGCTACTCTCGGCAGGTTTTTCTTGAGTGGAGGATTATACTGGAAGATCAAGTACGTTAACCGTCTTCAGTATCTTTGGGATGACATAAAGAAAGGAGAGATCGAGATACCAGAATTTGTACAACAGCATGATGATATTTTGGAGAATAGGCCACTCACTGATTATGGAATTGAACCCGACCCCTTTCACTTGACTGGGATGCCTTCAACTTCATACTCATTTGGAAAATATGAAGACAGATGGGCTGGAAGGGGTCATATCTCTGAATATGAATATCGCTAA 762 0.4488 MGGNTSEDFSVVVLASDFAVDARPFLFHDAEQQQEEENWHDCSQYLSPDEDFSDLEQLQFITLQGSDKNGARILRIVGKHYPATIVSAERLKRYVFHKIFSELLEGPFCIVYMHSTVQKEDNSPGMTILRWIYEELPDDFKDRLQTMYFIHPGLRSRLVIATLGRFFLSGGLYWKIKYVNRLQYLWDDIKKGEIEIPEFVQQHDDILENRPLTDYGIEPDPFHLTGMPSTSYSFGKYEDRWAGRGHISEYEYR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02248 253 Pfam Divergent CRAL/TRIO domain 70 204 IPR001251 -
Vifa5g02248 253 SMART sec14_4 47 205 IPR001251 -
Vifa5g02248 253 SUPERFAMILY CRAL/TRIO domain 52 194 IPR036865 -
Vifa5g02248 253 CDD SEC14 49 197 IPR001251 -
Vifa5g02248 253 Gene3D - 49 195 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02248 Vifa-Chr5 744226395 744227961 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02248 - - gmx:100527837 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02248 5 744226395 744227961 Vifa5g02248 5 744226395 744227961 ECH