Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02232 ATGGCTGATTTTGGCGAAGGCCTTCCCGTTGACGCGGTTTTATATTCAGGCGAAGATCCTATTTCAGCTCATAACAGATATCCAGAACTATGGGCCAAAATCAACAGAGAGATTGTGGAAGAATGGAAAAGCAAGTCTTTAGAAAATTTGAATGAAAACCGAGACGACGGTTTGGTTTTCTTCATGAGAGCAGGTTTTAAAGATAGCCCGAAATGGGGGATGCTGTTTTGGGAAGGAGATCAAATGGTGAGTTGGCAAGCAAACGACGGAATCAAGAGTTCCGTTGTTGGTCTACTTAGCAGTGGAATATCCGGCTATGCCTTTAATCACAGCGACATCGGAGGATATTGTACAGTTAACTTACCGATAGTTAAATACAGAAGAAGTCAAGAATTGCTTTTGCGCTGGATGGAGCTTAATTCTTTCACCACCGTCTTCCGCACTCATGAACAGGGAAACAAACCATCATGCAACAGCCAGTTTTACTCAAACCAACAAACTCTATCACACTTTGCGCGCACTGCAAAAATATACACAGCATGGAAATTTTACCGAATTCAATTAGTGAAGGAAGCAGCGCGGAAAGGATTGCCTGTATGTCGCCACCTATTTCTCCATTATCCTAACGATGAACATGTCCATAACTTGAGTTATCAACAATTCTTGGTTGGTTCTGAGTTTCTAGTGGTGCCTGTTCTTGACAAAGGAAGGAAGAAAGTTAAAGCTTATTTTCCATTGGGAGAGACTAGTAGTTGGACACATATATGGACAGGAAAAGTGTTTTCAAAACAAGGAAGTGAATCATGGATAGAAGCTCCAATGGGTTATCCTTGCGTGTTTGTTAAGGTTGGTTCCATTATTGGAGAAACCTTTTTGAATAACCTGAAAATTTTAGGCATTCATTGA 906 0.4095 MADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINREIVEEWKSKSLENLNENRDDGLVFFMRAGFKDSPKWGMLFWEGDQMVSWQANDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRSQELLLRWMELNSFTTVFRTHEQGNKPSCNSQFYSNQQTLSHFARTAKIYTAWKFYRIQLVKEAARKGLPVCRHLFLHYPNDEHVHNLSYQQFLVGSEFLVVPVLDKGRKKVKAYFPLGETSSWTHIWTGKVFSKQGSESWIEAPMGYPCVFVKVGSIIGETFLNNLKILGIH 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02232 301 Pfam Glycosyl hydrolases family 31 21 287 IPR000322 GO:0004553|GO:0005975
Vifa5g02232 301 Gene3D Glycosidases 1 229 - -
Vifa5g02232 301 Gene3D - 230 282 IPR013780 -
Vifa5g02232 301 SUPERFAMILY (Trans)glycosidases 3 196 IPR017853 -
Vifa5g02232 301 PANTHER SULFOQUINOVOSIDASE 1 297 - -
Vifa5g02232 301 SUPERFAMILY Glycosyl hydrolase domain 198 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02232 Vifa-Chr5 737856993 737858096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02232 8 287 Glycoside Hydrolase AT5G63840 28.014 1.06e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02232 - - gmx:100779005 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02232 5 737856993 737858096 Vifa5g02232 5 737856993 737858096 ECH