Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02162 ATGAGACAGTTTAGAATGGCTGTGGCCATTGATCAACAACCCCATGGATTTAAGCCATTTAGTCGATCCCAAAGATGCAAACTCCAATCCTATGGTCACCTTGATTACAACAACTTTCTTGATCTCAACCAAACTACTTTTCTAGCATTTCAAGCCGAGAATATTCACCGAAGTTTCTCCACTCCATGTCTACCCGTAAACGGGGTAGAAGATCTCCATCCTCCTCATCCGAGGGTGGAGATCGTTCGTGGAAGTGGAGCTCCCGTACACGCTCTAGTCGTTGAGGTTGCCGTTGCTATGGCCTCAGGTATTCAGCCTATACTACTCCCCAGTGGACTTGGTGGTGCCTATGTTTTCCCCAACACAAATGGTAACAATATTGCTGTAGCAAAGCCGGTAGACGAAGAACCTTTCGCCTACAATAGTCCGAAAGAGTTTAAAAGTAACAATCATCAAATGCTAGTCCAACCTGACTTAAAACGCTCTATTCGTATTGGCGAAACTGGAATAAGAGAACTGGCTGCTTATCTACTTGATCATGGAGGCTTTTCTGGTGTGCCTCCAACTGCTTTAGTTAAATTCTGTCATGCTACATTCTCTGAGTCTTCTTCCACAGTTAAACTCGCCTCACTCCAACGCTTTGTTGGCCACAGTTTCGATGCAGGAGAGTTAGGCCCTTCTCTCTTCTCAGTTGATTCTGTTCACAAAATTGGTATTCTAGACATTAGGCTTATGAATCTTGATAGACATGCAGGGAATATGCTTGTTATGAAACACGACAACAATAGTTTTGTTGACAGTGTTGCTACCACCGATCTTGTTCCGATTGATCACGGCTTTTGCTTGCCCGAGTGGCTGGAGGATCCTTACTTTGAGTGGCTGCATTGGCCACAAGCCTCAGTTCCTTTCTCTGAATCAGAACTTGACTATATTTCAAAACTTGATCCTTCAAAAGATGCTGATATTCTAAGATCCGAGGTTCCTTCGTTGAGAGAATCGTCTATTCGCGTTCTTATCGTCTGCACCGTTTTCTTGAAACAAGCTGCTGCTGCTGGCCTTTGTCTTGCTGATATAGCCCAGATGATGACAAGGAAATTTTGCGGCGGCGAGGAATCGCAGAGCGAATTGGAAAATATTTGTTTGAAAGTTAAGGCTGGTATTAACAATGAGAATGTAGAGGACAAAGATGATGGAGAGACTAAAACTAATTATGGAATTGGTGGCATTTCTTTTGGTGACATGAACAAAGGTGAATGGGAATTGTTTGTAGAGATTTTTGATAAGTTTGTAATTGGAGTTTTTGAGGATAAGAAGTGTAAAAATTGA 1326 0.4261 MRQFRMAVAIDQQPHGFKPFSRSQRCKLQSYGHLDYNNFLDLNQTTFLAFQAENIHRSFSTPCLPVNGVEDLHPPHPRVEIVRGSGAPVHALVVEVAVAMASGIQPILLPSGLGGAYVFPNTNGNNIAVAKPVDEEPFAYNSPKEFKSNNHQMLVQPDLKRSIRIGETGIRELAAYLLDHGGFSGVPPTALVKFCHATFSESSSTVKLASLQRFVGHSFDAGELGPSLFSVDSVHKIGILDIRLMNLDRHAGNMLVMKHDNNSFVDSVATTDLVPIDHGFCLPEWLEDPYFEWLHWPQASVPFSESELDYISKLDPSKDADILRSEVPSLRESSIRVLIVCTVFLKQAAAAGLCLADIAQMMTRKFCGGEESQSELENICLKVKAGINNENVEDKDDGETKTNYGIGGISFGDMNKGEWELFVEIFDKFVIGVFEDKKCKN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02162 441 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 103 395 IPR000403 -
Vifa5g02162 441 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 50 440 IPR044571 -
Vifa5g02162 441 Pfam Phosphatidylinositol 3- and 4-kinase 113 357 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02162 Vifa-Chr5 718445850 718447175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02162 6 396 Acyl Lipid Metabolism Gene Families AT2G40850 60.891 1.58e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02162 - - gmx:100809677 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02162 5 718445850 718447175 Vifa5g02162 5 718445850 718447175 ECH