Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02153 ATGATGTCCAGTCCATGTTGTGCACTAACCCATAACCCCTTTCTGTCACCCCCCGCCGTAACCGTTTTCCCTCAACCCACTCCCCTTCACTTTCAACCACTCTCTTACCGCTCTCCATCTCTCTTCACTCACCTGCGCCTCCGTCATCCTCGCCTCTCCGCCCTCTCCGACGACGGTTCCGGCGGATCTGGTGGCACTCCCGGAAATGGCGGATCTGGTGGCTGGAATTCCGGTGGAAACGAATCTGAGGACGAAGAGGGAAAATGGTCCTTCTTGTCATGGTACTTGGCTCTTCTTGCAAAGTATCCTGTTCCTGTTAAGGCCTTAACATCTGCAGTTTTGACACTAATTGGAGATTTGATTTGCCAGCTTGTGATAGATAAAGTGGAGACACCGGACTGGAAGAGGACATTTCTCTTTACACTGCTTGGTATCGTGTTAGTTGGTCCAACACTGCATTTCTGGTACTTGTATCTGAGCAAATTGGTTACACTTCCTGGAACATCAGGTGCACTTTTGCGGCTTGTGATTGATCAGTTCTTATTTTCTCCCATATTTATTGGAGTTTTCTTATCTACATTGGTGACGCTAGAGGGAAGGCCATCACAAGCTGTACCTAAGCTTAAACAGGAGTGGGTTTCTGCTGTTATAGCAAACTGGCAATTATGGATACCTTTTCAATTTCTCAACTTTAGATTTGTTCCACAACAATTTCAGGTCCTTGCTGCTAATGTTGTTGCTTTGGTGTGGAATGTTATTCTCTCATTTAAAGCACACAAAGAAGTTCTTCCAAAATAG 798 0.4586 MMSSPCCALTHNPFLSPPAVTVFPQPTPLHFQPLSYRSPSLFTHLRLRHPRLSALSDDGSGGSGGTPGNGGSGGWNSGGNESEDEEGKWSFLSWYLALLAKYPVPVKALTSAVLTLIGDLICQLVIDKVETPDWKRTFLFTLLGIVLVGPTLHFWYLYLSKLVTLPGTSGALLRLVIDQFLFSPIFIGVFLSTLVTLEGRPSQAVPKLKQEWVSAVIANWQLWIPFQFLNFRFVPQQFQVLAANVVALVWNVILSFKAHKEVLPK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02153 265 Pfam Mpv17 / PMP22 family 197 255 IPR007248 GO:0016020
Vifa5g02153 265 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 91 256 IPR007248 GO:0016020
Vifa5g02153 265 MobiDBLite consensus disorder prediction 53 82 - -
Vifa5g02153 265 MobiDBLite consensus disorder prediction 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02153 Vifa-Chr5 716200724 716203511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02153 91 261 Miscellaneous Gene Families AT2G14860 28.902 4.54e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02153 K13347 - gmx:100790392 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02153 5 716200724 716203511 Vifa5g02153 5 716200724 716203511 ECH