Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02151 ATGAATCCACTATTAACCTCCAGATACAGAATCTTCCAACCAACCACAACTTCATTCTCACCCTTTTTCCTCTTCAACCAAAAACGATGGAAAAAACCCGTTATTTCAGCCCAAACCCGTTTGGAGGACCGAGTCAGAGACCCACACTTGGACAAATTAACAACCCATTTCAAAAAACTCAACCTTGTCCTCAAAATCCACATCCTCATGTCAAATCGAAAACGCGGTTCTTTCGTTTCGCTTCAGCTCATGTCCCGCTGGAGAAACATCCTCGGACTCAATGTCACTGTTACTTCCTTTCTTCAAAAGTACCCTCATGTTTTTGACCTCTTTCTTCACCCTTTTAGGAGGAACATGTGTTGCAGAATCACGAGGAAGATGAAGGAGTTGATATTGTTGGAGGATGTTGTTGCGAAAAGCTGCGAGCTTGAGATTGTGATGAGGGTAAAGAAGTTGCTTATGATGTCGTTGAATGGTACTCTTCATGTGCATGCTTTGAGGTTGATGAGAAGAGAATTGGGTCTTCCTTGTGATTTTAGAGACTCCATTCTCGGGAAATATAGTGATGAGTTTAGGTTGGTTGATTTGGAGATTGTGGCTTTGGTTGGTTGGGATGATGAATTGGGAAAGGCTCGTGTTGAGGAATGGAGGGAGAGAGAGTATAGAGAGAAATGGTTAAGTGAATTTGAGACAAAATTTGCTTTTCCTATGAGTTTTCCAACCGGGTTTAAGATTGAAAGAGGGTTTAGGGAAAAGATGAAAACTTGGCAGAGGCTTTCTTATACAAAGCCTTATGAGAGAAAAGATGTAAAATGCGGCGGAGCGCAACGATATGAGAAGAGGGCTGTTGCTGTTCTTCATGAGGTGTTGAGCTTGACCTTGGAGAAAATGGTTGAGGTTGATCAATTGGCTCATTTTCGAAGGGATTTTGCTATCGAAGTTAATATGCGTGAGCTACTGCTTAGGCATCCGGGGATATTTTACATATCGACAAAGGGAAATGCTCAAACTGTTTTTCTTAGGGAGGCTTATGAGAAAGGAGGGTTGGTTGAGCCTAATCCGGTGTACACAGTTCGCAGGAATATGTTGGAGCTTGTGTTATTAGGGCGCAGGAAAACCAAACAATTATTAGCTTCCGATGAAATTATGGAAGAGAGCAATGCTGTAGTATGTGAAGTAGATAGGGAAAGTAAAAGAGAAGGAGATTGGGCAATTCCATTCTTGGAGGGTTACGAGAAGAATTGA 1245 0.4201 MNPLLTSRYRIFQPTTTSFSPFFLFNQKRWKKPVISAQTRLEDRVRDPHLDKLTTHFKKLNLVLKIHILMSNRKRGSFVSLQLMSRWRNILGLNVTVTSFLQKYPHVFDLFLHPFRRNMCCRITRKMKELILLEDVVAKSCELEIVMRVKKLLMMSLNGTLHVHALRLMRRELGLPCDFRDSILGKYSDEFRLVDLEIVALVGWDDELGKARVEEWREREYREKWLSEFETKFAFPMSFPTGFKIERGFREKMKTWQRLSYTKPYERKDVKCGGAQRYEKRAVAVLHEVLSLTLEKMVEVDQLAHFRRDFAIEVNMRELLLRHPGIFYISTKGNAQTVFLREAYEKGGLVEPNPVYTVRRNMLELVLLGRRKTKQLLASDEIMEESNAVVCEVDRESKREGDWAIPFLEGYEKN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02151 414 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 22 386 IPR045040 GO:0003723
Vifa5g02151 414 Pfam Plant organelle RNA recognition domain 45 370 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02151 Vifa-Chr5 715969503 715970747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02151 - - gmx:100789857 603.208