Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02150 ATGGCTTCCTTCCCTCCTCCTGGTTCACTCACCCTCTGCGAACTCAACCGCGACCTAATCACCGTCGACGCACTCTCCGACGATCGAGCCGATCAAACCTACGGAAAGCATCTCGGATTCGTGTTCAGCCCCGTGCCGTTTCAGCCTCCGCCACCGCCTCTCGAGAACGATGTTCCCGAACAGGAACCAACCACCACCGCCGCCGTAACCGTTCCTAGAAAAGGTCCTCTGGCACTTTTGCAAGGCCTTGTAAACGAGTGTCTCAGACGCCTCGTTTACCCCAACGATGTGCATTTGTTGCCTGAGGTTAATCTTCAAGGAGTGAGTTGGCACCTTAATAGACATATAGTTTCTTTTATTTCTGGGCCTAACCAAGTATTAGTTCGCGATTATGAAGATCCAGATGGGAAGGATTCAATTATTTTGACCAACGAGTCTCAGAGAGATGTTAAAGTGCTAGAGTGGAGACCGAATGGTGGGAGGATGCTGGCTGTGGGTTGCAAGAGTGGAATTTGCATATGGTCTGCTTCATATCCCGGAAACACCGCATCTGCTAGATCTGGCACTATATCCTTTGTAGGAAGTTTATCGAGAGGCTCTGGAATTCGGTATCTCCTGGTTGATTTTCTTCGAAGTCAGAATGGTGAACATGTTAGCGCCCTTACTTGGAGTCCGGATGGAAGATATCCTTTTAAATCTTCTGCTTCATACGAGAGCTCTTCTTTCACTGTGTGGGATGTTGCTCAAGGTGTGGGGACACCTATTCGACGAGGATTAGGAGGCATATCAATGCTAAAGTGGTCACCCACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTTTGGGAAACAAACACTTGGACATCAGAACAATGGTCATCAACTAGTAGTGGTTTTGTCAAGTGTGCAACATGGGATCCAGATGGGCGTATGGTACTGCTTGCATTTTCCAAATCATCAACTTTGGGATCTGTTCATTTTGCATCGAAGCCTCCCTCGTTAGACACACATCTGTTACCTGTTGAGTTGCCAGAGATATTATCATTGACAGGCAGTCAGGGAATTGAAAAAATAGAATGGGATAATTCAGGGGAGAGATTGGCTGTGTCTTTTAAAGGTGGGGATGACGTATATGGGGGGCTAATCGCCATCTATGATACAAGAAGAACTCCTCTGATATCTACATCATTAATTGGATTTATAAGAGGACCAGGAGAAAATCCAAAGCCGATCTCATTTTCATTTCATGGGAAGTTTAAGCAGGGGCCATTGCTCTCTGTGTGTTGGAGCAGTGGATTCTGTTGCACTTACCCTCTCTTGTTCCGTTCTCATATGCTTACATAA 1356 0.4587 MASFPPPGSLTLCELNRDLITVDALSDDRADQTYGKHLGFVFSPVPFQPPPPPLENDVPEQEPTTTAAVTVPRKGPLALLQGLVNECLRRLVYPNDVHLLPEVNLQGVSWHLNRHIVSFISGPNQVLVRDYEDPDGKDSIILTNESQRDVKVLEWRPNGGRMLAVGCKSGICIWSASYPGNTASARSGTISFVGSLSRGSGIRYLLVDFLRSQNGEHVSALTWSPDGRYPFKSSASYESSSFTVWDVAQGVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSSGFVKCATWDPDGRMVLLAFSKSSTLGSVHFASKPPSLDTHLLPVELPEILSLTGSQGIEKIEWDNSGERLAVSFKGGDDVYGGLIAIYDTRRTPLISTSLIGFIRGPGENPKPISFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRSHMLT 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02150 451 Gene3D - 258 441 IPR015943 GO:0005515
Vifa5g02150 451 SMART WD40_4 135 175 IPR001680 GO:0005515
Vifa5g02150 451 SMART WD40_4 248 287 IPR001680 GO:0005515
Vifa5g02150 451 SMART WD40_4 203 246 IPR001680 GO:0005515
Vifa5g02150 451 SMART WD40_4 346 390 IPR001680 GO:0005515
Vifa5g02150 451 PANTHER ALADIN/ADRACALIN/AAAS 2 447 IPR045139 -
Vifa5g02150 451 FunFam Aladin isoform A 210 440 - -
Vifa5g02150 451 SUPERFAMILY WD40 repeat-like 105 435 IPR036322 GO:0005515
Vifa5g02150 451 Gene3D - 101 254 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02150 K14320 - gmx:100808599 721.85