Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02145 ATGGGTTTATCCAAGGACTCATGCTGTGTTTTTATGCTTCAACTCTTCATACTTGTCTGTCTTTTGGTCCAATGCTTTGATGTCAAAGTACATGCTGATCTTAATGCAACACTCATTGTAGATGCTTCCCAAGCATCTGCTAGGCCAATACCAGATACTCTATTTGGATTATTCTTTGAGGAAATCAATCATGCTGGAGCTGGTGGATTGTGGGCCGAGCTTGTCAGCAACCGAGGATTTGAAGCCGGGGGGCCTAACACTCCTTCAAATATTGATCCGTGGTCAATTATTGGAAATGAAACGAATATTAATGTTGAAACGGATCGTACATCTATCTTTGAACGTAACAAGGTTGCACTTCGATTGGAGGTGTTATGCGACAATACCTGCCCCGCAGATGGTGTTGGCGTTTATAACCCTGGCTTCTGGGGCATGAATATTGAGCAAGGGAAGAAATATAAAATCGTCTTCTATGCTCGTTCAACTGGACCTCTTAATCTAGTAGTTTCGTTCACTGGACCGAACGGTGTGGGAAACCTCGCTTCAACCGTGATCACTGGTTCTGCATCTTATTTTTCAAATTGGACCAAGGTTGAGACTATATTGGAGGCCAAGGCAACGAGTCGAAACTCGAGACTTCAATTAACGACAACTGCAAAGGGTGTGATATGGTTGGACCAAGTGTCTGCTATACCAGTGGACACATATAAGGGACATGGCTTCCGAAATGATCTTTTTCAAATGCTGGTAGATATGAAACCAAGTTTTATCAGATTTCCGGGTGGTTGTTTTGTCGAAGGCGAATCTTTAAGAAATGCATTTCGATGGAAAGCTTCCGTTGGACCTTGGGAGGAGAGACCAGGGCACTTCGGAGATGTATGGAAGTACTGGACTGATGATGGACTTGGCTATTTTGAGTTTCTCCAACTATCAGAAGACTTGGACGCTTTACCAATATGGGTATTCAATAATGGTGTAAGCCATACCGATGAAGTTGATACATCCGCCGTTTTACCTTTTGTGCAAGAAGCCCTTGATGGACTTGAGTTTGCGAGAGGTGACCCGACTTCAAAATGGGGTTCCCTCAGAGCGGCTATGGGACATCCGGAGCCATTTAACCTAAAATATGTTGCTGTTGGCAATGAGGATTGTGGGAAAAAGAACTATCGTGGAAACTACCTGAGGTTCTATAGTGCAATAAGACATGCTTATCCAGATATTAAAATCATCTCAAACTGCGACGCTTCTTCGACTCCTCTAGATCACCCTGCCGATCTTTATGATTATCATATCTATACTGGCGCTGATGACATGTTTTCTAGATCTACGACATTTAATCGAGTAACACGAAGTGGTCCAAAGGCATTTGTAAGTGAGTATGCGGTGACCGGAAAGGATGCCGGGCAAGGAAGTCTTTTGGCAGCCCTAGCCGAAGCTGGATTCCTCATTGGACTGGAAAAGAATAGTGATATTATCGATATGGCTAGCTATGCTCCCCTTTTTGTAAATGCCAACGATAGGAGGTGGAACCCCGATGCAATTGTATTCAACTCTTTTCAGCTCTACGGAACTCCTAGCTACTGGATGCAGTTATTTTTCGCAGAGTCAAATGGAGCAACACTTCTGAATTCATCACTTCAAACGAATTCCTCGAAAACACTAATTGCATCAGCAATTACTTGGCAAAATTCTGTTGATAAGAAAACTTACATACGAATAAAGGCTGTGAACTATGGTGCCAGTGCCGTGAACCTCAAGATTTCTATCAATGGATTGGACCCAAATTCATTGCAGTCTTCCGGGTCAACAAAAAGTGTGCTTACATCTGCAAATGTAATGGATGAAAATTCCTTCTCGCAGCCAAAAAAGGTGGTTCCAATCCAGAGTCTACTTCAAAATGTTGGGAAGGACATGAATGTGATAGTTCCACCACATTCATTCACATTACTTGATTTGTTGAAAGAAACCAATAAGCTGATGATGCCAGAGAGTGATTCTTCCACAAGATCTTCTATTTAA 2019 0.426 MGLSKDSCCVFMLQLFILVCLLVQCFDVKVHADLNATLIVDASQASARPIPDTLFGLFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWSIIGNETNINVETDRTSIFERNKVALRLEVLCDNTCPADGVGVYNPGFWGMNIEQGKKYKIVFYARSTGPLNLVVSFTGPNGVGNLASTVITGSASYFSNWTKVETILEAKATSRNSRLQLTTTAKGVIWLDQVSAIPVDTYKGHGFRNDLFQMLVDMKPSFIRFPGGCFVEGESLRNAFRWKASVGPWEERPGHFGDVWKYWTDDGLGYFEFLQLSEDLDALPIWVFNNGVSHTDEVDTSAVLPFVQEALDGLEFARGDPTSKWGSLRAAMGHPEPFNLKYVAVGNEDCGKKNYRGNYLRFYSAIRHAYPDIKIISNCDASSTPLDHPADLYDYHIYTGADDMFSRSTTFNRVTRSGPKAFVSEYAVTGKDAGQGSLLAALAEAGFLIGLEKNSDIIDMASYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWMQLFFAESNGATLLNSSLQTNSSKTLIASAITWQNSVDKKTYIRIKAVNYGASAVNLKISINGLDPNSLQSSGSTKSVLTSANVMDENSFSQPKKVVPIQSLLQNVGKDMNVIVPPHSFTLLDLLKETNKLMMPESDSSTRSSI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02145 672 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 4 658 - -
Vifa5g02145 672 Gene3D Glycosidases 215 534 - -
Vifa5g02145 672 SUPERFAMILY (Trans)glycosidases 210 541 IPR017853 -
Vifa5g02145 672 SUPERFAMILY Galactose-binding domain-like 73 231 IPR008979 -
Vifa5g02145 672 Gene3D - 535 652 IPR013780 -
Vifa5g02145 672 FunFam Alpha-L-arabinofuranosidase 1 534 653 - -
Vifa5g02145 672 Pfam Alpha-L-arabinofuranosidase C-terminal domain 459 646 IPR010720 GO:0046373|GO:0046556
Vifa5g02145 672 FunFam Putative alpha-L-arabinofuranosidase family protein 71 227 - -
Vifa5g02145 672 FunFam Alpha-L-arabinofuranosidase 1 228 534 - -
Vifa5g02145 672 SMART alpha_l_af_c 458 646 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02145 Vifa-Chr5 715184097 715188159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02145 7 669 Glycoside Hydrolase AT3G10740 69.115 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02145 K01209 - gmx:100806458 1129.78