Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02131 ATGGAAAGAGCAACAGCAATGAAAACCTTTGAATATAACCTGCCTCCAAAATCACCAATCTTAAGAGATAGAGCTGCATCTTTCTCATCATATCTCAACCCCCAAAAGCCAAACACTCGCACACTCGAGGATCCCACATCTGAGCTCAGCATATTCGACGCACACAAATATTTCAACGAAGTTACCAACAATGACAACATCCAAAAAGTTACAATCAGCAGCAACAACAACAACAATAATAGCAATAACAATAGCAGAGTCTCGCCTGTAGTGGTTAATGTAAACAACGAAACAGAGAACATCGTTATACCAGATAACACAAGATACTCCTCTGCTTCTTCCACAGTAGATAGTTACTCAAACATCAGAAACTATAGAGCACGTTCCTTCCATTCAGCAACACCAACAGCTTCATCAGAAGCTAGTTGGAATAGTCAACAAGGTTTGTTATCTCACCCAGCAGGTGCTATCTCAATTAACATAAAAAACCCTTCAAATCCAAACCCCAACAACAACAACAACAACACGTTTAGAACATCACTTTCCAAACCCATTTGGCTCTTAAGGAGAAAATGTCCTTGCACAGGTAAAAAATCAGTTCAAGTCAGAGAAAAAAAGTCAACAGAATTACCCAAAAGTACTATCAAAATCCCTTCACCAGTTTCGCCATCACCATCACCACCACCACCACTACCGATGAACAATTACATGGACCAAACACCAACTCTTGTAACTAAATCTCAAAGATTTCAACCGGTGGTAACAACCGTAAGAGTACCTTACACAGACGGATTTACATTCCCAGTGCTAAACCCTAATACAACCTCAACAACAGCGAAACACAAAAACGGCATCGTTTTGGACGATCCACCTCGAGAATCACTCGAGGTATTCCAACCACCGGACGAAATAAAAGTGGATATGAAATCCCTAAATTTCCCCTTCCCGCCGCCTATGTCGCGAATCGTCGTTGACGACGGCGACGCCGCAAGTGACGCGAGCTCCGATTTGTTCGAGATCGAGAGTTTCTCAACCGCAACACAATCTTCGTACGGTGCCGCTGCTTACCGGAGAAACAGTAGAGACTCATTTGACGAAGGATCGGTGACGACGGCAATGACGGAGTGTTACGAGCCGAGCGAGGCGAGTATTGAGTGGAGCGTGACAACCGCTGATGGATACGACGAAACTAGCTACATCGGTGGAGTTGGCGGTGGAGGTAGTAGTGGCGGCGGCGTGACGGCGGAGCATTGCAAGAGAAAAGGAGGGAACGGTGGTTTGTTAGTGAGCTGTCGGTGTGAGAAAGCGGTTAGTGTGGGGCCACAGCCGGTGAAATGTGAGGGACAAAAAGGGGCCACGTCAGCATGGAAAAACGTAAGTGGGGGTGTAAATAATAGGGCAGGGGGTGTAAATAAACCACCACTTGCTAGGTCTTCTTTATCTCACAGAAACAACAACAACAACACACCTCGTGTCACCTCTTTTTCTTTTGCGACATAG 1500 0.4527 MERATAMKTFEYNLPPKSPILRDRAASFSSYLNPQKPNTRTLEDPTSELSIFDAHKYFNEVTNNDNIQKVTISSNNNNNNSNNNSRVSPVVVNVNNETENIVIPDNTRYSSASSTVDSYSNIRNYRARSFHSATPTASSEASWNSQQGLLSHPAGAISINIKNPSNPNPNNNNNNTFRTSLSKPIWLLRRKCPCTGKKSVQVREKKSTELPKSTIKIPSPVSPSPSPPPPLPMNNYMDQTPTLVTKSQRFQPVVTTVRVPYTDGFTFPVLNPNTTSTTAKHKNGIVLDDPPRESLEVFQPPDEIKVDMKSLNFPFPPPMSRIVVDDGDAASDASSDLFEIESFSTATQSSYGAAAYRRNSRDSFDEGSVTTAMTECYEPSEASIEWSVTTADGYDETSYIGGVGGGGSSGGGVTAEHCKRKGGNGGLLVSCRCEKAVSVGPQPVKCEGQKGATSAWKNVSGGVNNRAGGVNKPPLARSSLSHRNNNNNTPRVTSFSFAT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02131 499 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 17 463 IPR039615 GO:0009638
Vifa5g02131 499 MobiDBLite consensus disorder prediction 159 178 - -
Vifa5g02131 499 MobiDBLite consensus disorder prediction 455 499 - -
Vifa5g02131 499 MobiDBLite consensus disorder prediction 477 499 - -
Vifa5g02131 499 MobiDBLite consensus disorder prediction 198 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02131 Vifa-Chr5 705465586 705467085 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02131 - - tpra:123889734 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02131 5 705465586 705467085 Vifa5g02131 5 705465586 705467085 ECH