Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02062 ATGGACTACTCTCACACTCACGCCACCAACAACCACCGCATCGCCGATCCAAATGGGATGAAGGATGCAGTCAAATTGGAATATCATATTCATTATCTGGAAATTGAGGCTTATAGTTCCATGTTGAAGGCTTTTAGTGCTCAATCAGATCTTCTTACTTGGGGAAAAGAGGAGCTCTTGACTGAACTACGAAAGGAGTTGAATATTGCTGATTCTGAACATGGACAGATTCTGAGTAAAATAAATTCCGATGAGTCAATTAGATGGATAAGGGAGCAAAGGAAAGGGGCTTCTCATTCTCATGCTCAGGGTTATATTCAAACTAATACTTCTAGGTGTCATTCCGCTTCAATTGGAAATTCAACTATAAGATTGAAAACTCCATCATCGGCTACATTTTATCCTCAGAATAATATGTCGCACAATCAAGCTTCTCTTAATTCTATTCATGTTTCTGCTCCAATGTCTGTCTATGGGAATGCTGAGCAACCCAAGGAAATGTTCAATTATGATATTCAGCTGCCACCTATTGGAAGAGGGAGTGTGCCGAAAGGGAATTATCAGTTTAAGCAGTACTGTCAACCATCCGAGTGTCTCACATTAAACAACAGAGATAACTTAATTGAGATACGTGCAACTGATAGGGTTATTCATGATGTTGAAAAGATGCTTTTTGGTAGAGAGAAGCCTGGTCCAGTTGATATTGAGAATGCGAAACGGGCTCTTGATGAGCAAGAAAGAGCTATACTTGAAGCACTCGGTAAACTGGGAGACGTGTTAGACGGGACAACAGGATGCTGCGAAATCTCCAACCGAGGGCAAGAAATGACGGTCCATGGTAGTTTCAGTGGGACTGATTGGTAG 864 0.4144 MDYSHTHATNNHRIADPNGMKDAVKLEYHIHYLEIEAYSSMLKAFSAQSDLLTWGKEELLTELRKELNIADSEHGQILSKINSDESIRWIREQRKGASHSHAQGYIQTNTSRCHSASIGNSTIRLKTPSSATFYPQNNMSHNQASLNSIHVSAPMSVYGNAEQPKEMFNYDIQLPPIGRGSVPKGNYQFKQYCQPSECLTLNNRDNLIEIRATDRVIHDVEKMLFGREKPGPVDIENAKRALDEQERAILEALGKLGDVLDGTTGCCEISNRGQEMTVHGSFSGTDW 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02062 287 SMART ENT_2 26 99 IPR005491 -
Vifa5g02062 287 Pfam ENT domain 29 96 IPR005491 -
Vifa5g02062 287 SUPERFAMILY ENT-like 24 103 IPR036142 -
Vifa5g02062 287 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 26 116 IPR005491 -
Vifa5g02062 287 PANTHER PROTEIN EMSY-LIKE 4 192 263 IPR033485 GO:0050832
Vifa5g02062 287 Coils Coil 235 255 - -
Vifa5g02062 287 Gene3D ENT domain 21 156 IPR036142 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa5g02062 Vifa-Chr5 683229845 683233286 Dispersed/Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02062 - - ccaj:109802952 275.789