Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02059 ATGAAGTTTTTCACTAGAAGGAAGCAGGTTGATTCTGCACGTAAAAACACTAAGTCTCTGCTTGCAAAGGAGTTAAATATTTTTCATCTTATTGGAATTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTTTGGTTGGGACAGTAGCTAGAGAACATTCTGGACCAGCTTTGGCTATTTCTTTTCTGATTGCTGGCTTAGCAGCTGGTCTATCAGGTTTTTGCTATGCTGAGTTGGCTTGTCGATGCCCTTCTGCCGGAAGCGCGTATCACTATTCATACATATGTCTTGGAGAAGGTGTTGCTTGGTTGATTGGCTGGGCCTTGGTACTGGAATATACAATTGGTAGTGCAGCTGTTGCTCGTGGTGTAACCCCTAATCTTGCTCCAATTTTTGGTGGTCTGGACAATCTACCGTTCTTTTTGTCGCGCCAGCATATTCCTGGGATTGATATTATTGTGGACCCATTTGCAGCAATTTTGGTATTACTTGTTACAGGACTCCTATGTTTGGGGATCAAGGAGAGCACGGTGGTACAAGGCATAGTAACATCGGTGAATGTATGTGCATTGCTTTTTGTAGTAGTAGCTGGTGGTTACATCGGATTCAAGTCTGGATGGGCTGGATATGAACTTCCTACTGGATATTTTCCATTTGGGGTTGATGGGATGCTTGCTGGTTCCGCAACAGTCTTCTTTGCATACGTAGGTTTTGATGCAGTTTCCAGTACTGCCGAAGAGGTGAGAAATCCTCAGCGAGATTTGCCACTAGGCATCGGTGCTTCATTGTTTCTCTGTTGTGGAATATATATGCTGGTCTCCATTGTTGTCGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACACCAATATCCTCTGCATTTGCTGTCCATGGGATGCAATGGGCCGCTTACATTATAAATGCCGGAGCTTGCACAGCTCTCATCTCAGCGTTGATGGGTGGAATACTTCCCCAGCCACGGATTTTGATGGCAATGGCAAGAGATGGACTACTGCCACCATTTTTTTGTGACATAAATAAGCACACTCTAGTTCCTGTGAAGGGCACAATAGTTACTGGCCTTGCCGCTGCGGTCTTAGCATTTTCTATGGAAGTCTCTGAACTTGCAGGGATGGTTAGTGTCGGTACACTCTTAGCGTTCACCATGGTGGCATTATCTGTGCTGATCCTAAGATATATTCCTCCAAATAAAATCCCAGTGATCGAAGACGTAAATGAAGACGAAAGTGTTAGTACTTCTGAAGACACAAAACCTTTAGATGTTACGCAAGATTTTCCCATTGATCATCCTCTTATTTCTAGTCACCCTGTCATAGGCAAATATGTAAACGAGGGTAATAGAAGAAGACTTGTTGGACGGACCATAGCACTCATATGCTTGGGAGCGTTTGTCCTCACATTTGCAGCTTCATGTTTAAGTTTTCTTAGTTATGTTCGCTTTGCATTGTGTGGAGTTGGAGGCATTCTTCTTGTGTTTGGATTTGTCTTCCTATCTTGCGTAGATCAAGATGAAGCGAGGCACGACTTTGGTTACTCTGGAGGTTTCATATGCCCATTCGTGCCACTGCTGCCTATAACTTGCATTCTCATAAATTCCTACCTGCTAATTAATCTCGGATTGGAAACATGGTTGCGCGTTTCTATATGGTTGGTAACAGGACTTGTAATCTATGTGTTTTACGGCCGAACTCATAGCTCTCTAAAAGATGCAATTTATTTGCCAGCAAGTCAAGTGGACCAAACCTATCAAACTCCGAGAGACTATCTTGCTTAA 1803 0.4321 MKFFTRRKQVDSARKNTKSLLAKELNIFHLIGIGVGSTIGAGVYVLVGTVAREHSGPALAISFLIAGLAAGLSGFCYAELACRCPSAGSAYHYSYICLGEGVAWLIGWALVLEYTIGSAAVARGVTPNLAPIFGGLDNLPFFLSRQHIPGIDIIVDPFAAILVLLVTGLLCLGIKESTVVQGIVTSVNVCALLFVVVAGGYIGFKSGWAGYELPTGYFPFGVDGMLAGSATVFFAYVGFDAVSSTAEEVRNPQRDLPLGIGASLFLCCGIYMLVSIVVVGLVPYYAIDPDTPISSAFAVHGMQWAAYIINAGACTALISALMGGILPQPRILMAMARDGLLPPFFCDINKHTLVPVKGTIVTGLAAAVLAFSMEVSELAGMVSVGTLLAFTMVALSVLILRYIPPNKIPVIEDVNEDESVSTSEDTKPLDVTQDFPIDHPLISSHPVIGKYVNEGNRRRLVGRTIALICLGAFVLTFAASCLSFLSYVRFALCGVGGILLVFGFVFLSCVDQDEARHDFGYSGGFICPFVPLLPITCILINSYLLINLGLETWLRVSIWLVTGLVIYVFYGRTHSSLKDAIYLPASQVDQTYQTPRDYLA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02059 600 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 6 576 - -
Vifa5g02059 600 FunFam probable cationic amino acid transporter 21 414 - -
Vifa5g02059 600 Gene3D Amino acid/polyamine transporter I 445 587 - -
Vifa5g02059 600 Gene3D Amino acid/polyamine transporter I 21 412 - -
Vifa5g02059 600 Pfam C-terminus of AA_permease 525 575 IPR029485 -
Vifa5g02059 600 PIRSF AA_transporter 449 586 - -
Vifa5g02059 600 PIRSF AA_transporter 3 411 - -
Vifa5g02059 600 Pfam Amino acid permease 25 406 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02059 Vifa-Chr5 681705097 681708508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02059 1 600 Organic Solute Cotransporters AT5G36940 62.726 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02059 K13863 - gmx:100784895 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02059 5 681705097 681708508 Vifa5g02059 5 681705097 681708508 ECH