Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02055 ATGTATCTCCCCCGCCATACACTCATCAGAACCTTCCTCCACCGCCGCCCCTTCTCCCATTCCGCCGCCGCCATCCTCCACCCTCCAGAGCCAGACCTAGAGCCTCTCACCTACCTCCCAGGCTTTCCAAAACCCGAACCTAAGTACGACGAGACCATCCTCGCTATCCCCCGCAGAGATTCCGGGAAGAACATTTCGGCAAAGGAGCGCAAAGTCGGCCGCGTTCCGAGCATAGTCTTCGAACAGGAAGACGGCCAGCACGGCGGTAACAAACGCCTCATTTCCGTCCGCTCCGATCAGATCAGGAAGCTCGTTAACCACCTCGGACGCTCGTTTTTCCTCTCACGTCTCTTCAATCTACAAGTTCTTCACCAATTCGACTCCGATTCAAACGCTAACGTCGACGATATCATTGAAAACGTTCGCGTTTTGCCCCGCAGTATTCATTTGAAAGCTGGCACAGATGCACCTTTGAATGTTACATTTATAAGGGCTCCGTCAGATGCTTGGTTGAAAGTTGATATTCCTATTGTATTCATAGGAGATGATATATCCCCTGGACTCAAGAAAGGTGCTTCTTTGAATACCATCAAAAGGACTGTTAAGTACCTATGCCCTGCAGACATTATTCCTCCATATATTGAAGTGGATTTAAGTGAGTTAGATGTGGGCCAGAAGGTGCTCATGGGCGATCTCAAAATTCATCCTGCATTAAAACTTCTTCACTCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAACTACAACCAAAGAAATCCAAGTAA 798 0.4799 MYLPRHTLIRTFLHRRPFSHSAAAILHPPEPDLEPLTYLPGFPKPEPKYDETILAIPRRDSGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFNLQVLHQFDSDSNANVDDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDIPIVFIGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIEVDLSELDVGQKVLMGDLKIHPALKLLHSKDEAVCKIMGQRVSELQPKKSK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02055 265 SUPERFAMILY Ribosomal protein L25-like 57 253 IPR011035 GO:0006412
Vifa5g02055 265 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 168 254 - -
Vifa5g02055 265 Gene3D Ribosomal Protein L25; Chain P 52 165 IPR020056 -
Vifa5g02055 265 Gene3D Ribosomal protein L25, beta domain 167 260 IPR037121 -
Vifa5g02055 265 Pfam Ribosomal L25p family 55 162 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Vifa5g02055 265 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 33 258 - -
Vifa5g02055 265 Pfam Ribosomal protein TL5, C-terminal domain 172 253 IPR020057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02055 Vifa-Chr5 680667875 680671191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02055 K02897 - gmx:100809143 417.157