Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02053 ATGGCCAGAAGCGCGGGTCGATTGACCTTCACGCGATGCTTTTTCTACTTCTCTCTCAACCTGCTTTTCTTCTTCTTCATTTCTTCACTCGCCGATGATCAACAAACCCTAACCACTCTCAAAGGTGTTGATATTGAAAGACCAACTTTGGATGTATCTCCTTCCTTACTTTTGGACAACTCTGATACTGAAGGTGTTAAGAATAAAAACGTTAAGCTATGTGAGCGTCTTCAAGTTTCTGGCATCTCAAGATTGAAGCTCAGAAGCTATGCTAATTCATATCATATTACTTTGGCTCCATCTGTTGCCATTCCAGAAAGATTGCATGCCAAAATTAAGATTTGTTTTCACAGGAACAACACTCTTGGATGGTGTCAGTGTGAAAAGGATGAATGGAGGGGTGTACAAAAGGGGATCTGGAGTGCAGTTATGTCACCTTATGAGACTAGATATGTTGATGTCAGGATTCATGGTGAATTACCGGGTTCAGTTACAATTGCACTTGAAGAAGGTTTTCAGCAATGGCGTCTCATTAGTCTTGCTGTTGGATTGATACTGCTGCTATTGGCTCCAATTATCAGCAGCTGGGTTCCGTTTTATTACAGCAGTTCAATGGCCATTGGAATCTTTCTTGTTGTTATAATCATTCTTTTTCAGGGCATGAAATTTTTGCCAACTGGAAGAAAAAATTTCTTTTACCTTGCCATATATGGATCAGTGCTTGGAGCTGGGTCATTCCTTTTGCACCAATTCTCTATGATCGTAAATTCAATTCTTCAGAGTTTTGGGATGAGTGAAGAGATGCACAATCCTGTTGCCCTTTTTGTACTACTGGGTATCGTCTTGGCTGGAGCTGCTTTAGGTTACTGGATTGTCAGGAGATTTGTTATTTCAAAAGAAGACGGTAGTGTGGATGCTGGGGTAGCTCAGTTTGTGAAATGGGCAATGCGCATTATCGGGGCTACCTTTATTTTGCAGAGCACTCTCGATACTCCTCTTGCAATTGGGGCCTTAATCTCTTGTGTTGCTGTTTGCCAAATTGGTTCTTTAATAAAATTACTTCATGAATGGTATGAAACTTCAGGGAATGATGATTATTCACTAGAGTGGGTGAGAGGAACTCCAGGTCGTGCAGAATTCCTTAGCAAGTCACCTCCTAAGGGAAAAATTTGGAATAGCCCTAAAAGTGGCTCCAACGGAAAACTGTGGAACAATCCTAAAAGGACGTCATGGTCTGACTCTCCTGTGAGAGGTATTGTATCACCCTCTTCTGGATATTCGACACAAACTTCTGGGACTCAATTAGGGACAAATTACTATTCAACATTTCACAAGACGGGCAACAGAAAGAAGTTCACCAAGGAAGAGTGGGATGACTTCACCAGAGACTCCACCAAGCAAGCTTTAGCTGAATGGGCAGCATCTCCAGAATTCACTGACTGGATTATTGACCATGCTGATCGGATAAAACTGCTTCCGAGCGAGAGTTCGGATGAGATAATGGGGAGTGAATCGGATTCCACTGAAGGAGGAAGTGGAAATGATGGATTTCGATTTTTTAGCTGGCAGTGA 1572 0.4211 MARSAGRLTFTRCFFYFSLNLLFFFFISSLADDQQTLTTLKGVDIERPTLDVSPSLLLDNSDTEGVKNKNVKLCERLQVSGISRLKLRSYANSYHITLAPSVAIPERLHAKIKICFHRNNTLGWCQCEKDEWRGVQKGIWSAVMSPYETRYVDVRIHGELPGSVTIALEEGFQQWRLISLAVGLILLLLAPIISSWVPFYYSSSMAIGIFLVVIIILFQGMKFLPTGRKNFFYLAIYGSVLGAGSFLLHQFSMIVNSILQSFGMSEEMHNPVALFVLLGIVLAGAALGYWIVRRFVISKEDGSVDAGVAQFVKWAMRIIGATFILQSTLDTPLAIGALISCVAVCQIGSLIKLLHEWYETSGNDDYSLEWVRGTPGRAEFLSKSPPKGKIWNSPKSGSNGKLWNNPKRTSWSDSPVRGIVSPSSGYSTQTSGTQLGTNYYSTFHKTGNRKKFTKEEWDDFTRDSTKQALAEWAASPEFTDWIIDHADRIKLLPSESSDEIMGSESDSTEGGSGNDGFRFFSWQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02053 523 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 14 497 - -
Vifa5g02053 523 Pfam NEMP family 166 445 IPR019358 -
Vifa5g02053 523 MobiDBLite consensus disorder prediction 494 515 - -
Vifa5g02053 523 MobiDBLite consensus disorder prediction 498 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02053 Vifa-Chr5 679774891 679778884 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02053 - - psat:127126609 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02053 5 679774891 679778884 Vifa5g02053 5 679774891 679778884 ECH