Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02052 ATGATTACTCTATCTAGTTGCACTTTATTGCCTCTTAACTCAGAGTTCCGCTTCCACCCGGTTCGCCGCTCCTTCAGGACCCCAATTCAGTGCCACCGTCTCAATTCACATGTATCCAAATGGGGGAAGTTGAAGCGCGTTGAGTTTGATAGGTTTAGGTGTTTTTCGATTAATAATAAAGATGGTGTTGATGGTGAAGGGGAAAGTGGTAACAATAATGATTCTAAATCCAATGTAACCACTGCGTCGCCTGAGGAAGATAGAGGCTTCAATTCTGATAAATCAACAACTCCCTCCACTTCTCAAAGGTCATCTCTGTCCTCACTTGGATCTGCATACAACAATTTTCAACTTGATTCTTTCAAACTCATGGAACTCCTTGAACCTGAGACGATTGATCCTGCTGATGTAAAGCTAATTAAGGATAAGCTTTTTGGTTATTCAACCTTTTGGGTGACCAAAGAGGATCCTTTTGGGGAATTGGGAGAAGGCGTTCTTTTCATTGGAAATTTACGGGGAAAGAGAGAGGATGTTTTTTCCATACTCCAAAATCGGCTAGTTGAGGCCACTGGTGATAAATACAACCTTTTCATGGTGGAGGAACCTTTTTCATACAACCCTGATCCACGGGGTGGGCCACGTGTTAGCTTTGGTTTGCTACGGAAGGAGGTTTCTAAGCCAGAGGCAACAACACTTTGGCAATATGTCATTGCATCTTTGTTGTTTTTTCTCACTATTGGTACCTCAGTGGAGCTGGGAATTGCATCTCAGATCAACAGACTTCCTCCAGAACTTGTGAAATTCTTGACAGATCCTAAGTATACGGAAGTCCCAGATATGAAGCTGCTATATCCATTTCTTGACTCAGCGTTACCTCTAGCATATGGTGTCTTGGGGGTTCTTTTATTTCATGAGGTTGGACACATTTTAGCTGCATTTCCCAAACAAATAAAATTAAGCATTCCTTTCTTCATTCCCCACATCACACTTGGAAGCTTTGGTGCCATTACTCAGTTTAAATCCATCCTTCCTGATAGAAGTACACAAGTAGACATATCACTTGCGGGTCCCTTTGCTGGTAGTGTGCTATCATTTTCAATGTTTGCTGTTGGTCTTCTTCTTTCATCAAATCCAGATGCAGCTGGAGATTTGGTGCAAGTCCCTAGCACGTTGTTTCAAGGTTCCTTGCTACTTGGTTTAATCAGTAGAGCGACTCTTGGTTATGCAGCAATTCATGCTGCAACAGTTCCAATTCACCCTCTTGTGATTGCAGGATGGTGTGGTTTAACCATCCAAGCTTTTAACATGCTTCCAGTGGGGTGCCTTGATGGTGGCAGGTCAATGCAGGGTGCTTTTGGAAAAGGTGCACTAATTGTCTTTAGTCTGATAACTTATTCATTGCTAGGGTTGGGAGTGCTTGGTGGACCTCTTTCTCTTGCTTGGGGATGTTTTGTTATATTTGCGCAGAGGACACCGGAGAAACCATGCTTAAACGATGTGACAGAAGTTGGAACATGGAGACAGACATTTGTGGGGGTTGCTATTTTTCTTGCTGTCTTGACTCTTCTGCCTGTTTGGGATGAGCTTGCAGATGAACTTGGCATAGGTCTTGTAACCACACTTTAG 1626 0.4305 MITLSSCTLLPLNSEFRFHPVRRSFRTPIQCHRLNSHVSKWGKLKRVEFDRFRCFSINNKDGVDGEGESGNNNDSKSNVTTASPEEDRGFNSDKSTTPSTSQRSSLSSLGSAYNNFQLDSFKLMELLEPETIDPADVKLIKDKLFGYSTFWVTKEDPFGELGEGVLFIGNLRGKREDVFSILQNRLVEATGDKYNLFMVEEPFSYNPDPRGGPRVSFGLLRKEVSKPEATTLWQYVIASLLFFLTIGTSVELGIASQINRLPPELVKFLTDPKYTEVPDMKLLYPFLDSALPLAYGVLGVLLFHEVGHILAAFPKQIKLSIPFFIPHITLGSFGAITQFKSILPDRSTQVDISLAGPFAGSVLSFSMFAVGLLLSSNPDAAGDLVQVPSTLFQGSLLLGLISRATLGYAAIHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRSMQGAFGKGALIVFSLITYSLLGLGVLGGPLSLAWGCFVIFAQRTPEKPCLNDVTEVGTWRQTFVGVAIFLAVLTLLPVWDELADELGIGLVTTL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02052 541 CDD S2P-M50_like_2 240 466 - -
Vifa5g02052 541 MobiDBLite consensus disorder prediction 65 86 - -
Vifa5g02052 541 MobiDBLite consensus disorder prediction 93 107 - -
Vifa5g02052 541 PANTHER ZINC METALLOPROTEASE EGY1 53 535 IPR044838 -
Vifa5g02052 541 MobiDBLite consensus disorder prediction 63 107 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02052 K25380 - gmx:100808073 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02052 5 679764461 679768620 Vifa5g02052 5 679764461 679768620 ECH