Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02042 ATGGCGACGAAGCTCAAGTATCTATCCTCCATTGCTGAAGATGTCGTCACTAGATGCGCACAAAAATTGGACATCACGGTAGAGAAATTGGTGGAAGATTTCGAACGAGGACGGAGTCCAGATGCAGGAAACTATTGCAAAAATTTAGTTGAATTTTGCAGTGGGAAGACTCTGAGTGAAATGTGTTGTAAATTAGAGGAAGAAATAAATAATGGTTCGTTTAGTAGGTTATCCTTTGATATTATGCTTGCTTGGGAGAGACCTTCCTATTATGATGACAATGAGTGCCTGGAAGTTGAAGCAAAGGAGAAAGAAGAAAAGAAGAAGCATGTGAAAACTACACAAGAACAGGATGATATCTCTCTTTTTTATTCAGACATCATGCCCCTTCTTGTTACAAATGAGCCGAGTGTTGGAGAGGATGCATTTGTATGGTTGGGATCATTAGTTCCATTAGCTTCAGATGTAACAAATGGAAGGTTTACTTTTGAATCGTTAACGGCACCAACGGGCTTCCAGCTACATTTTCCAGCATATGACATGTTCTTGAAAGAAATGAGCAAGTGCATAAGGCATTTGCAGAAACAGGCAATGCCAACTGGTGTGGAACTAGCGGAAGACGAATATATATTACATGTAGAAGGAACGGCCAGCTCTCAGAGAGTAATTCGCCACATTGGATCGACAAGTTGGCCTGGTAGGCTTACACTGACCAATTATTCTGTTTACTTCGAGACTTCGGGAGTAATAAAGTATGAAGATGCTCTCAAAATAGACCTCTATAAGGATATTGAGCAGAGTGTTAAACCAGGCGCAACAGGTCCATGGGGAGCCCAACTTTTTGACAAGGGCATAGTGATTGAATCATCTGATTTATCAGAGGGAGTTGTGCTGGAGTTTCCAGAGCTTACAAGTTCTACAAGACGTGACCATTGGCTTGCATTGATAAGGGAAATAATGTTTCTCCATCAATTTTTATCAAAGTACCAGATAAAATGTCCAATACAAACATGGGAGATGCATGCAAGGACAATATTAGGAATCATAAGGCTTCACGCAGCAAGAGAAATGCTAAGAATATCACCTCCGGTCCCAACAAAATTCTTAATATTTTCCTTATATAATGAAATACCGAAGGGTGATTATGTGCTAGAAGAGCTTCCAGATGTCCTCAGAAAGGTTAAGAGTGGACAGCCATGTAGTGCAAGTTCTATACTTAGGAGTATGAACATTGCTGGTCCAGTAGTCTCCGATTCGATAGAAGAAGAGGCGAGTCAAGCAGACAAAAGTATGGATGTTTTAGACGACAGCTTCTCCCTGGAGTCTGGTATTAAAAAATCAAGGGAGGACGAAAAGAAAGTTTCCGCAAAAGCTACTCCTGAAGAGTTAAAGGAGAAAGAAGTCGTGGACAGTGTTCTCGTTCTAACTCCCTCGTTGGAGTGTGCTATTAAACAATCTAGGGAGGAAGAAAAGAAAGTTCTTGTTGCGAAAGCTACCACTGAAGAATTAAAGGAGGAAGGAGTCATCGACAGTGTTCTGGTTCTAACGGAGCTACTAAAGCCACTTAAAAATGTGGTCCCTTGGTTACAAGAAATATTCACATGGGAAAGACCAATACATACTCTTGCTGTTCTTGCTGCATCCCTAATAATCACTTATATGGAATGGGTTGGAAAGGGAGCTGCAGCATTCTTGGTATGGGTGATAGTAAAGATGCTTGAGGCAAGAGAGAAAAAGCTTAATGAGCAATGCAATGAGATAGTAGTCAGTAGATATGATATGGCTTCTGATCAATCTACGATGGATAACATTGTCTCAGCCCAACATGGATTTTACACTGTTCATGAGATGATGCAGATAGCAAACATAGCAATGTTAAAGATATGGTCCATACTTATTTCAAAGGCAGACAAGCATGCAAAGACAGTGATGGTGGCAATAGGGGGATTAGCATTCTTATTAGCAGTAATACCATTCAAGTTCTTCCTAATGGGTTTCATTGTGCAAAGTTTCACCATGGCGTTCAAGACAAGCAAGTCTTCAGGAACTGGGAATAGAAGGTTGAAGGAATGGTGGGACTCAATACCAGTAGTCCCTATCCGTGTAGTAGACAATGTTCCTAACTCTCAACATGCTAAATAG 2142 0.4076 MATKLKYLSSIAEDVVTRCAQKLDITVEKLVEDFERGRSPDAGNYCKNLVEFCSGKTLSEMCCKLEEEINNGSFSRLSFDIMLAWERPSYYDDNECLEVEAKEKEEKKKHVKTTQEQDDISLFYSDIMPLLVTNEPSVGEDAFVWLGSLVPLASDVTNGRFTFESLTAPTGFQLHFPAYDMFLKEMSKCIRHLQKQAMPTGVELAEDEYILHVEGTASSQRVIRHIGSTSWPGRLTLTNYSVYFETSGVIKYEDALKIDLYKDIEQSVKPGATGPWGAQLFDKGIVIESSDLSEGVVLEFPELTSSTRRDHWLALIREIMFLHQFLSKYQIKCPIQTWEMHARTILGIIRLHAAREMLRISPPVPTKFLIFSLYNEIPKGDYVLEELPDVLRKVKSGQPCSASSILRSMNIAGPVVSDSIEEEASQADKSMDVLDDSFSLESGIKKSREDEKKVSAKATPEELKEKEVVDSVLVLTPSLECAIKQSREEEKKVLVAKATTEELKEEGVIDSVLVLTELLKPLKNVVPWLQEIFTWERPIHTLAVLAASLIITYMEWVGKGAAAFLVWVIVKMLEAREKKLNEQCNEIVVSRYDMASDQSTMDNIVSAQHGFYTVHEMMQIANIAMLKIWSILISKADKHAKTVMVAIGGLAFLLAVIPFKFFLMGFIVQSFTMAFKTSKSSGTGNRRLKEWWDSIPVVPIRVVDNVPNSQHAK 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02042 713 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 4 475 - -
Vifa5g02042 713 Coils Coil 94 114 - -
Vifa5g02042 713 Pfam Plant protein of unknown function (DUF639) 478 705 IPR006927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02042 Vifa-Chr5 677445471 677448585 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02042 - - psat:127126618 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02042 5 677445471 677448585 Vifa5g02042 5 677445471 677448585 ECH