Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02032 ATGGAGGAACAACCTTCAGAGAAATCACGCCGAGAACGAAGGAAAGAGTCTCGGTTGGCGAAGAATGCATCCAAACACCAATCCTGGCTTCAACGCCATGTAAAATCCGAAGCTTTAAAAAGGACTAACAATCAAAATCCGGAGTTTAAGTCTGAAAGCAAAATCAATGAAACACAACCTGTGAAGAAAGTGAAATCTTTGTCTAAGGAATGTGCCTTGTCAGAAGGCCCTGTTGTAAAGAAAGTGAAGAAGGGTTCTCAGTCCAGTTCCAAGAAGAAAAGGGTTGACCTGGGTTTGTCTGAAGTTTCAATGGCTGCCCAGAGGGATTTAGAGTTGGAAAGAAAACTCTCCAAGAGGCTTAAGGTGAAAGAAGGAAAGTTGGGGGGAATGGATGATGGATTGAACTTGTTATTTGAAGGAATGCCGTCTGCCAATGATTTATTTCGAGATATGGAGGGTTTTGATACGGATGAATTACCCAAAAGAAAGTCGAACAAGAGCCAGTCAAGTAAGAAGTGTAAGTTGTCGAAAGAACGGGTGGAAGTAGATTCATTAGATGATGTGCCGGGACCTGTGGAAGCTAATGAAGAAGTTCCCGATAGTGGAACTTCTAGGAAGAAGAAGAAGAATAAGAAAAGAAAATTGTCGAGTCAACAGCAGGAAGATGGTGTGGAGGACGGTGTTGCATGCATTGTCAAACCTATGGAATCGCGTGGAACGGATGTGACATCGGGGGATGTTGCTGAAGTTCTTGAGAAGAAAGAGAAAGGAAAGTATATAGCGCCTCACTTGCGAGCTCGGGCTGGCAATGAACCTGAGGAGCATACTCAAATTCGAAGACGTGTACGAGGCCTTCTTAACAGGATTTCTGAATCAAATGTCGAGTCAATTACTGGAGAATTGTCCTTGATCTTTCAGTCTGTTGCTCGAAGTGTTGCTTCACAGATTATGATTGAGGAGACTTTAGCATCATGTTCTGGAGGGCCTCGTGGAAATAAACAATATGCTGCTGTGTTTGCTGCGTTTGTTGCCGGGATGGCATGTATGGTTGGTATGGACTTCGGTGCAAAGTTTATGGCTTCCTTTGCCAAATGCTTTGAGGATGAGTACAATAAAGAAGACAATCTCTCCTTGCGGAATATTGCGCTTCTCTTATCCTATTTATGCATATTTGGGGTCTGTTCTAGTGATTTAATATTTGACTTTCTAGTCATGTTGGGCAAGCATTTGACTGAGGTGGATGTCTCTATTATTTTGACTGTGTTACAAAGTTGTGGGATGAAAATACGGGCCGATGATCCAGCTGCCATGAAAACATTCATTCTTAATGTTCAGGATACATCAAATAAGTTGAAGGCTTCCTCTGGAGATGACCCTGAAAAAAATAACAGCAAAAGAATGGAGTTCATGCTTGAAACCATATATGATATCAAGAACAACAAGAAGAAGACAGAAGAGGTTTCCCCTCGAATTAAAAAGTGGCTGCAGAAGTTAAGAGTTGATGATATTTCACTTAGAGGGCTTACATGGAGTAAGTTACTTGATCCTAACAAGAAGGGACAATGGTGGTTATCCGGAGATGTGGTTTCTTCAAAAGATAATGTCGAAAACGTCGCTAACAAAATAGACAAAGACGTTGCTGAAACCCAACGAATGCTGCAGCTTGCTGCTGATCAAAGGATGAACACAGATTCCAGACGGGCAATCTTTTGTATTATAATGTCCGGGGAGGACTATATTGATGCATTTGAAAAGCTTCTGAGATTGGAATTACCAGGCAAGCAGGACAGAGATATAATTCGGGTTCTTGTTGATTGTTGCCTGCAAGAGAAAGTTTTTAACAAGTACTATACAGTGCTGGCTTCCAAGTTGTGTGAACATGACAAAAATCACAAGTTCACTTTACAGTTTTGTCTATGGGACCACTTTAAGGAGCTGGAGTCTATGACTCTTTTGAGGTCAATTCACCTAGCAAAGTTTGTGGCCGAAATGGCTGCAGCTTTCACTCTCTCCCTCGCAGTTTTGAAGACTGTGGATCTTAGTGACATCACTCAACTAACTCCAAGAAGGATTATGCATTTCCGCATTCTGTTTGAGACTATTTTCGAATATCCCGAATCCGTGGTGTGGAAGATATTCACTCGTATCGCAGGGACTCCTGAACTTGAAAGTTTTAGACAAGGCGTTGAGTTTTTCATTAAGGAGTACATTTTGAAAACAAATAAAGCTGTATCTCAGAAATTTAAGTTGGCAAAAAAAGCCCTTAGTAATATAGAAGGAGTCCTGATGCAAGAGTAA 2298 0.4143 MEEQPSEKSRRERRKESRLAKNASKHQSWLQRHVKSEALKRTNNQNPEFKSESKINETQPVKKVKSLSKECALSEGPVVKKVKKGSQSSSKKKRVDLGLSEVSMAAQRDLELERKLSKRLKVKEGKLGGMDDGLNLLFEGMPSANDLFRDMEGFDTDELPKRKSNKSQSSKKCKLSKERVEVDSLDDVPGPVEANEEVPDSGTSRKKKKNKKRKLSSQQQEDGVEDGVACIVKPMESRGTDVTSGDVAEVLEKKEKGKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRISESNVESITGELSLIFQSVARSVASQIMIEETLASCSGGPRGNKQYAAVFAAFVAGMACMVGMDFGAKFMASFAKCFEDEYNKEDNLSLRNIALLLSYLCIFGVCSSDLIFDFLVMLGKHLTEVDVSIILTVLQSCGMKIRADDPAAMKTFILNVQDTSNKLKASSGDDPEKNNSKRMEFMLETIYDIKNNKKKTEEVSPRIKKWLQKLRVDDISLRGLTWSKLLDPNKKGQWWLSGDVVSSKDNVENVANKIDKDVAETQRMLQLAADQRMNTDSRRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIIRVLVDCCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDHFKELESMTLLRSIHLAKFVAEMAAAFTLSLAVLKTVDLSDITQLTPRRIMHFRILFETIFEYPESVVWKIFTRIAGTPELESFRQGVEFFIKEYILKTNKAVSQKFKLAKKALSNIEGVLMQE 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02032 765 SMART ma3_7 565 671 IPR003891 -
Vifa5g02032 765 SMART if4_15 279 481 IPR003890 GO:0003723|GO:0005515
Vifa5g02032 765 MobiDBLite consensus disorder prediction 150 186 - -
Vifa5g02032 765 SUPERFAMILY ARM repeat 272 482 IPR016024 -
Vifa5g02032 765 MobiDBLite consensus disorder prediction 1 22 - -
Vifa5g02032 765 Pfam MIF4G domain 280 481 IPR003890 GO:0003723|GO:0005515
Vifa5g02032 765 FunFam MIF4G domain-containing protein / MA3 domain-containing protein 246 524 - -
Vifa5g02032 765 Gene3D - 245 525 - -
Vifa5g02032 765 Pfam MA3 domain 566 666 IPR003891 -
Vifa5g02032 765 ProSiteProfiles MI domain profile. 564 680 IPR003891 -
Vifa5g02032 765 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 3 758 - -
Vifa5g02032 765 MobiDBLite consensus disorder prediction 1 62 - -
Vifa5g02032 765 MobiDBLite consensus disorder prediction 40 54 - -
Vifa5g02032 765 MobiDBLite consensus disorder prediction 147 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02032 Vifa-Chr5 674615573 674628672 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02032 K17583 - gmx:100778579 1021.92