Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02026 ATGGAAAGCAAGATTGCATATAAACGGTCTTATGAGGATTTTGATCCTATTTTTAAATGGCGTAGAGAACAAGACCGTGACACCGTTGTACTTCATCTGCCAGGTTTTAAGAGAGAACAAATGAGAATTCAGGTGAACCATCTTGGTTTTTTGGTGATAAGTGGAGAACGTCCACATGATGGAACAACATGGAAACGTTTCAAGAAAGAGTTTGAGCTTCCAAAATATTGCAATGAAGATGCTATTCGTGGCAATTTCATGCAGAATATTCTTTCTGTGGTAATGCCGAAGAAAGTTGATCTAATACCTCAAGAGGAGCAAGTCGAAGAAATGCCGGAACTTGAAGACGACGATGAATATCAAGAGAAAACTGCATATAAGAGTTTGAAATTTGGAGGAACAAGTGGAGAAGAAGAGAGTGAACAGAGAGATAAAGAGAGGCTATATGAATATGCTGACACGAGAGAAAATCAATTTGGAGAAAATGATGTAGAAACTACTAGAGATGTTGCTTTTAAATTCATGGTTGTGATTATTGTTGTAATGCTTATTGTAAATTATCTAGTGGATATGAGCAAAAGCCTCATGGGTGACGCTCATTCCTTTTTTCAAAATTAG 618 0.3689 MESKIAYKRSYEDFDPIFKWRREQDRDTVVLHLPGFKREQMRIQVNHLGFLVISGERPHDGTTWKRFKKEFELPKYCNEDAIRGNFMQNILSVVMPKKVDLIPQEEQVEEMPELEDDDEYQEKTAYKSLKFGGTSGEEESEQRDKERLYEYADTRENQFGENDVETTRDVAFKFMVVIIVVMLIVNYLVDMSKSLMGDAHSFFQN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02026 205 SUPERFAMILY HSP20-like chaperones 10 106 IPR008978 -
Vifa5g02026 205 PANTHER HEAT SHOCK PROTEIN 26 3 127 - -
Vifa5g02026 205 Pfam Hsp20/alpha crystallin family 20 101 IPR002068 -
Vifa5g02026 205 Gene3D - 2 100 IPR008978 -
Vifa5g02026 205 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 8 114 IPR002068 -
Vifa5g02026 205 CDD ACD_sHsps-like 20 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02026 Vifa-Chr5 673589044 673589885 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02026 - - pvu:PHAVU_001G113500g 191.815