Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02009 ATGCTTCCTCCTTCTACTCTTTACCACTACTCTCATAGTTATGCTGCATCTTCATTGAAGAGTTTTTGGTTCTTTGTTCCAACTACCTTAGCTCTATTAACCTCACTTTTCATTCTATTCTATATCTATTATACTTCAATCATATTCACCATTCATCATCAACATTACAACCTTCAACCTACTTTTCAATTCAAATCACCATCTCCTACCTTACACCCCAATCGTTCTGAGTTCATCAACACTTTCAAATTGGATGGCTATGAACTACAAAGTCAACATGGTTTAGCATCACAAGCCAGCTCAAAGGAATCAAATCCGATAGGGAATGCTATTACTTATGGTTCACAAAAATTTGATGTGTTCCACGATAAAGATATATTTCTGGAAGACTATAAAGAAATGAATAGAAGCTTTAAGATATATGTTTATCCACACAAGAAAGATGATCCTTTTGCAAATGTGCTTTTGCCAATGAAATCTGAACCTAGTGGAAACTATGCCAGTGAAAGTTACTTCAAAAAAGCACTCATGAAGAGCCATTTCATCACTAAAGATCCAACAGAAGCTGATCTTTTCTTCATGCCTTTTTCCATAGCAAGCTTAAGGCATGATCGAAGAATCGGTGTGGGAGGTATCAAAGATTTTATTAGAGACTATGTTGAGAATATCAATCGGAACTATCCGTATTGGAACCGCACCGGCGGCGCGGATCATTTTTATGTGGCATGTCATTCAGTTGGAAGGAGTGCAATGGATAAAGCAGAAGATGTGAAATTCAATGCCATTCAAGTTGTTTGCTCATCAAGTTATTTCTTGTCAGGTTATATTACTCATAAGGATGCATGCTTACCACAAATTTGGCCAAGAAATGATAATCCCTCCAACCTTGTTTCATCCATTAGGAAAAAACTAGCTTTCTTTGCTGGAGCAGTGAATTCTCCACTACGGATAAACGTCGTTGAGACATGGAAAAATGATTCAGAAATCTTTGTTCATCATGGAAGACTAAAAACACCATACGCAGATGAACTATTAGGAAGCAAGTTTTGTCTTCACGTTAAAGGCTATGAAGTGAACACAGCACGTATAGGAGATTCATTGTATTATGGTTGTGTTCCAGTGATCATTGCGGATTATTATGACCTTCCATTTGTAGATGTTTTGAACTGGAAGAGCTTTTCTGTTGTTGTGACTGCCTTAGACATACCTTTTCTGAAAAAGATTCTCAAAGGTATGGTTAGTTCTGGTGAGTATTTGAAGCTAAAGAAGAATGTGTTGAAGGTTAGGGAACACTTTCAATGGCATTCACCTCCAGTTGATTTTGATGTGTTCTGTATGGTTATGTATGAATTATGGCTTAGACGAAGTTCTATACCCATTTTGTTGGAGGCTTCTTAG 1398 0.3705 MLPPSTLYHYSHSYAASSLKSFWFFVPTTLALLTSLFILFYIYYTSIIFTIHHQHYNLQPTFQFKSPSPTLHPNRSEFINTFKLDGYELQSQHGLASQASSKESNPIGNAITYGSQKFDVFHDKDIFLEDYKEMNRSFKIYVYPHKKDDPFANVLLPMKSEPSGNYASESYFKKALMKSHFITKDPTEADLFFMPFSIASLRHDRRIGVGGIKDFIRDYVENINRNYPYWNRTGGADHFYVACHSVGRSAMDKAEDVKFNAIQVVCSSSYFLSGYITHKDACLPQIWPRNDNPSNLVSSIRKKLAFFAGAVNSPLRINVVETWKNDSEIFVHHGRLKTPYADELLGSKFCLHVKGYEVNTARIGDSLYYGCVPVIIADYYDLPFVDVLNWKSFSVVVTALDIPFLKKILKGMVSSGEYLKLKKNVLKVREHFQWHSPPVDFDVFCMVMYELWLRRSSIPILLEAS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02009 465 Pfam Exostosin family 135 410 IPR040911 -
Vifa5g02009 465 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 36 450 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02009 Vifa-Chr5 670331533 670333784 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02009 - - tpra:123890097 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02009 5 670331533 670333784 Vifa5g02009 5 670331533 670333784 ECH