Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02002 ATGAAAACTATGGTGACGCCATTGACAAGAGTCTCCACATATTTTCGCCCAAATGCCCATAATGCCCTTCCCTTCTCCCCCAAATCACGCAACCCTTCCTTACCAAACTTCACCTTCACCTCTCCCACTCCCACTCACACCCTCTCTCTTTCAATGGCCGCTTCTTCTCAATCAACTGCTCCGGTTGCGTCCTCTGGTGACGCTCACATAAAAAAAGATGACATTTTTCAATTAATTCAAGCTCATCAGGAAAAAGCTGCGAGACTTCCTCCACTTGAAGAAATTCGAACTGTCCTTGATCGTAGTGTACGTGGGACACTCTCCACATTCTCAAAGAAGTATGATGGTTATCCATCAGGGTCTATGGTTGACTTTGCATGTGATGCAAATGGATGTCTTATATTAGCAGTGAGCGACTTGGCTGTTCATTCAAAGGATTTAGCTGCTAATCCTAAATGTTCAGTGCTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTGGTGATCACTTTACATGGTGACGCTATCTTTGTACCTGATAAGGATAATGAGCCGATACGAGCTGCATATTTGGCAAGACATCCCAACGCGTTTTGGGTTGACTTCGGTGACTTCCGATTTGTACGCATTGAACCAAAAGTTGTACGATTTGTGTCAGGTGTTGCTACAGCTTTGTTAGCATCAGGAGAGTTTAGTGGAGATGAGTTCAAGTCTGCAAAAGTTGATCCGATATCTCAGTTTTCCAAGCCAGTAGCGTCGCATATGAACAAAGATCATGGTGAAGATACTAAAATGATTGTGCAGCACTGGACCTCAGTTCCGGTGGACTTTGCGGACATACTAGATTTGGATCGTCTAGGTTTCAATGTTAAGGCTGTTTATAAGGGAGATACTTTCAAGCTCCGTGTACCTTTTCCTCGACCTGCAGAAGATAGAAAGGATGTGAAGACTCTCATTGTTGAGATGCTCCAAGCTGCTAAGCCTCAAGTTTGA 993 0.4401 MKTMVTPLTRVSTYFRPNAHNALPFSPKSRNPSLPNFTFTSPTPTHTLSLSMAASSQSTAPVASSGDAHIKKDDIFQLIQAHQEKAARLPPLEEIRTVLDRSVRGTLSTFSKKYDGYPSGSMVDFACDANGCLILAVSDLAVHSKDLAANPKCSVLVARDPEDRTDLVITLHGDAIFVPDKDNEPIRAAYLARHPNAFWVDFGDFRFVRIEPKVVRFVSGVATALLASGEFSGDEFKSAKVDPISQFSKPVASHMNKDHGEDTKMIVQHWTSVPVDFADILDLDRLGFNVKAVYKGDTFKLRVPFPRPAEDRKDVKTLIVEMLQAAKPQV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02002 330 Gene3D - 241 330 IPR037119 -
Vifa5g02002 330 PANTHER CREG1 PROTEIN 77 326 - -
Vifa5g02002 330 Gene3D - 73 227 IPR012349 -
Vifa5g02002 330 Pfam Pyridoxamine 5'-phosphate oxidase 96 219 - -
Vifa5g02002 330 MobiDBLite consensus disorder prediction 19 40 - -
Vifa5g02002 330 Pfam Domain of unknown function (DUF2470) 249 322 IPR019595 -
Vifa5g02002 330 MobiDBLite consensus disorder prediction 24 40 - -
Vifa5g02002 330 SUPERFAMILY FMN-binding split barrel 92 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02002 Vifa-Chr5 667403536 667407123 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02002 - - gmx:100792427 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02002 5 667403536 667407123 Vifa5g02002 5 667403536 667407123 ECH