Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa5g02001 | ATGTCAACTGTGACCAATGCTACAAATATATTTTGGCAAGATTGTCAGCTGGGAAAGCCTGAACGGCAGAAGCTACTTAACCAAAAGGGATGCGTTGTATGGATTACTGGACTCAGTGGATCAGGAAAAAGCACATTGGCGTGTTCTCTAAGCAGCGAACTGCACTCAAAGGGAAAATTATCATATATCCTTGATGGAGATAACCTTCGCCATGGACTAAACAAGGATCTTGGTTTTAAACCTGAAGACCGCACTGAAAATATTCGCAGAACTGGTGAAGTGGCGAAACTCTTTGCCGATGCTGGTCTAATATGTGTTGCCAGTCTGATATCACCTTATCGAAGAGACCGTGATACTTGTCGTGCCATGTTGCCTAGTGCCAATTTTATTGAGGTCTACATGAACATGCCTCTAGCATTGTGCGAAGCACGGGATCCTAAAGGCCTCTATAAGCTTGCTCGTGCTGGAAAGATCAAAGGTTTTACTGGCATTGATGATCCTTATGAACCACCCTTGAATTGTGAGATAGAAATAAAGGAGGACAACGGAGTTTGTCCCGCGCCAAATGTGATGGCAGGACAAGTTGTTTCCTACTTGGAGGAGAAAGGGTTTCTTCATTGTTAG | 624 | 0.4391 | MSTVTNATNIFWQDCQLGKPERQKLLNQKGCVVWITGLSGSGKSTLACSLSSELHSKGKLSYILDGDNLRHGLNKDLGFKPEDRTENIRRTGEVAKLFADAGLICVASLISPYRRDRDTCRAMLPSANFIEVYMNMPLALCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKEDNGVCPAPNVMAGQVVSYLEEKGFLHC | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa5g02001 | 207 | Hamap | Adenylyl-sulfate kinase [cysC]. | 28 | 203 | IPR002891 | GO:0000103|GO:0004020|GO:0005524 | |
| Vifa5g02001 | 207 | Gene3D | - | 2 | 206 | IPR027417 | - | |
| Vifa5g02001 | 207 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 28 | 202 | IPR027417 | - | |
| Vifa5g02001 | 207 | CDD | APSK | 32 | 179 | IPR002891 | GO:0000103|GO:0004020|GO:0005524 | |
| Vifa5g02001 | 207 | PANTHER | BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE | 8 | 189 | - | - | |
| Vifa5g02001 | 207 | Pfam | Adenylylsulphate kinase | 29 | 181 | - | - | |
| Vifa5g02001 | 207 | NCBIfam | adenylyl-sulfate kinase | 13 | 182 | IPR002891 | GO:0000103|GO:0004020|GO:0005524 | |
| Vifa5g02001 | 207 | FunFam | Adenylyl-sulfate kinase | 1 | 207 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa5g02001 | Vifa-Chr5 | 667335772 | 667338274 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa5g02001 | K00860 | - | gmx:100793200 | 389.808 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vifa5g02001 | 5 | 667335772 | 667338274 | Vifa5g02001 | 5 | 667335772 | 667338274 | ECH |