Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01990 ATGGCACAGTTCACTACTCAAGGTCGGTTGAAGCTGTTTTTCAATGGGGAAAGTGTGTCATCTTTTTTTGAGAACAGAGACCCTTTTCAATTCAAGTGTAGATCAGTTCAGACCCACAGGAGAGGATCAAGTTACAAAGGTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTGGTGGTGCTAGATTTCATCATTCATCTTCTTCATTTCTCAGAAGGAAATTCAACTGTTATAATGCTGAAGCACGACCCAGTGAGGGTGTTCATGATGAATATGAATATGTTTTTAAATACAATTCTCTTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATCTTGATGATGATGATGATGATGATGATGATGTGTTTGAGGGAGATGGCTTGTCTTGTTTCCGGGGTCTTGTGTTGGATATATCTTACAGGCCAGTCAATATTGTATGCTGGAAGCGTGCCATTTGTCTAGAGTTCATGGACAAGGCTGATGTACTAGAGTATTATGATAAGACCGTGAACTCCCCCAGTGGATCTTACTATATACCGGCTGTCTTAAGGATTCGTCATTTACTTCAGGCTATTAAAAGAAGAAGAGTATCGAAGAACACTCTTAGCCGGAAAAATGTTCTGTTTAGAGACAATTACACTTGTCAGTATTGCTCTTCGCATGAGAATTTGACAATTGATCACGTTGTGCCAGTTGCACTAGGGGGAGAATGGACATGGGAAAATCTAGTGACTGCTTGTTTCAAATGCAACTCAAAGAAAGGTAGAAAGTCCATTGAGGAAGCGAAAATGAAGTTGAATAAGGTCCCAAAGGCACCGAAGGACTTTGATGTTCTTGCTATACCTCTAACTGCAGCAGCTCTCAGAGTGCTGACAGCAAGATCGGGGACACCAGATGAATGGCGTCAGTATCTAAGTTCCAACTATAGAACCAATAGTTAG 954 0.4109 MAQFTTQGRLKLFFNGESVSSFFENRDPFQFKCRSVQTHRRGSSYKGSSSSAAAAAAGGARFHHSSSSFLRRKFNCYNAEARPSEGVHDEYEYVFKYNSLDDDDDDDDDDDDDDDLDDDDDDDDDVFEGDGLSCFRGLVLDISYRPVNIVCWKRAICLEFMDKADVLEYYDKTVNSPSGSYYIPAVLRIRHLLQAIKRRRVSKNTLSRKNVLFRDNYTCQYCSSHENLTIDHVVPVALGGEWTWENLVTACFKCNSKKGRKSIEEAKMKLNKVPKAPKDFDVLAIPLTAAALRVLTARSGTPDEWRQYLSSNYRTNS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01990 317 PANTHER SLL1193 PROTEIN 130 310 - -
Vifa5g01990 317 MobiDBLite consensus disorder prediction 99 125 - -
Vifa5g01990 317 Gene3D - 188 283 - -
Vifa5g01990 317 Pfam HNH endonuclease 219 270 IPR029471 -
Vifa5g01990 317 CDD HNHc 208 259 IPR003615 -
Vifa5g01990 317 SMART HNH_5 206 256 IPR003615 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01990 - - aprc:113861293 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01990 5 664392707 664396752 Vifa5g01990 5 664392707 664396752 ECH