Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01985 ATGAAGTCATTGAGGTCCAATAAAATTGAAGAACAACAACATCAGAGTTTTCCCGACGAGTCAACAACTGAATCTACTAGCACAGGGATTGGCAAGAATCTCATAGTTGAAGATGATTTGAAATCAACATATGCTGTAGATTCACCTGCAGGTGCATCTGCATCTCTTCCAGAAGCTGCTCAAATTTCCAGAGATATTGATTTGTCTCCTGGTCAACCTTTACAATCAAATCAATCTGCTGGCCACCTTGGTGTCATTGGAAGAAGAAATGGTGTTGAACTTGGAGCCATTGGTGATAGCTTTAGTGCATCAAGTGTTAATTCTGGTGGAGTGCGCGATCAACTATATAATTTACAAATGCTTGAGGCAGCACATTTTAAAGTTCCACTAGCTAAAGACTCAGAACGTCCTAGAACCTATACTCCTAGGCATCCAACAATTACACCTCCTAGCTATCCACAAGTTCAAGCGCCAATAGTTAACAACCCTGCTTTTTGGGAGAGATTAGGTCTTGAGGCATATGGCACTGACACCCTGTTCTTTGCATTTTATTATCAACAGAACACATACCAACAATATTTGGCTGCAAAGGAGCTAAAGAAGCAGTCTTGGAGATACCACCGAAAGTATAATACATGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCTACAGATGATTTTGAGCAGGGAACATATGTGTACTTTGATTTTCATATTGCAAATGATGACCTGCAACATGGATGGTGTCAAAGAATCAAGACGGAATTCACTTTTGAGTATAATTATCTTGAAGACGAGCTTCTTGTATAG 810 0.4025 MKSLRSNKIEEQQHQSFPDESTTESTSTGIGKNLIVEDDLKSTYAVDSPAGASASLPEAAQISRDIDLSPGQPLQSNQSAGHLGVIGRRNGVELGAIGDSFSASSVNSGGVRDQLYNLQMLEAAHFKVPLAKDSERPRTYTPRHPTITPPSYPQVQAPIVNNPAFWERLGLEAYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDDFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01985 269 MobiDBLite consensus disorder prediction 1 17 - -
Vifa5g01985 269 Pfam NOT2 / NOT3 / NOT5 family 125 263 IPR007282 GO:0006355
Vifa5g01985 269 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 109 264 - -
Vifa5g01985 269 MobiDBLite consensus disorder prediction 132 154 - -
Vifa5g01985 269 MobiDBLite consensus disorder prediction 1 34 - -
Vifa5g01985 269 PANTHER CCR4 NOT-RELATED 11 266 IPR040168 GO:0030015
Vifa5g01985 269 MobiDBLite consensus disorder prediction 18 32 - -
Vifa5g01985 269 Gene3D - 109 264 IPR038635 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01985 K12580 - gmx:100785965 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01985 5 662557918 662559654 Vifa5g01985 5 662557918 662559654 ECH