Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01983 ATGGCTGAAATTTTGATGAAAACAAGCTTAGTTTCTTCTTGGCACGGAAACAGAAATCAACAACTTCAAAGGGCTTCCATGGTTCCATCTTTGAAGTTGAAATCTCAGTTTCTCAGATCTTCTTTTTCTTCGTCTGAGTTTCATGGCAAAAAACCTCTCTTTCGTGTATATAGATCAATACCCAAAAAGATCAATTCACAGTTTTCAGTTTCTGCTGCTCCTAAGATGACACTTAGAATAGGGAAAGCTCAGAAATGGTGGGAAAAGGGTCTTCAACCTAACATGAGAGAGGTGACTTCAGCACAAGATCTTGTAGATTCACTTTTAAACGCAGGGGACAAGCTTGTGATTGTTGATTTTTTCTCTCCCGGTTGTGGTGGCTGCAAAGCCCTTCATCCTAAGATATGTCAATTTGCAGAGATGAATCCTGATGTTGAGTTCCTACAAGTGAACTATGAAGAGCATAAATCCATGTGTTACAGCCTTAGTGTTCATGTTCTTCCTTTCTTCCGGTTCTATAGAGGCGCTCAGGGTCGTGTATGCAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAGAGATGCATTGGCCAAACACACTCCAGATAGATGCAGCTTGGGGCCAACCAAAGGGTTAGAGGAGAAAGAGCTCATAGCTCTATCTGAAAACAAAGATCTTTCCTTTACATACACGCCTCAACCTCTGCATACCCCTGAAGAGTCCAGGACCGAAGCTGTCCCTGCGAGTTCTGAGTCGCTTCCTTTACATTCATTGACATCAAACTCTGAAGTATTGGAGAGAACCCTAACCAGTGCTGGGAGATGA 828 0.4275 MAEILMKTSLVSSWHGNRNQQLQRASMVPSLKLKSQFLRSSFSSSEFHGKKPLFRVYRSIPKKINSQFSVSAAPKMTLRIGKAQKWWEKGLQPNMREVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVEFLQVNYEEHKSMCYSLSVHVLPFFRFYRGAQGRVCSFSCTNATIKKFRDALAKHTPDRCSLGPTKGLEEKELIALSENKDLSFTYTPQPLHTPEESRTEAVPASSESLPLHSLTSNSEVLERTLTSAGR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01983 275 Gene3D Glutaredoxin 87 205 - -
Vifa5g01983 275 ProSiteProfiles Thioredoxin domain profile. 67 202 IPR013766 -
Vifa5g01983 275 CDD TRX_family 111 198 - -
Vifa5g01983 275 SUPERFAMILY Thioredoxin-like 84 200 IPR036249 -
Vifa5g01983 275 FunFam Thioredoxin-like 1-2, chloroplastic 84 202 - -
Vifa5g01983 275 PANTHER THIOREDOXIN, MITOCHONDRIAL 48 233 - -
Vifa5g01983 275 MobiDBLite consensus disorder prediction 230 258 - -
Vifa5g01983 275 Pfam Thioredoxin 106 181 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01983 Vifa-Chr5 662266133 662267462 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01983 - - vra:106753897 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01983 5 662266133 662267462 Vifa5g01983 5 662266133 662267462 ECH