Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01973 ATGGCATATCCCTTCTCAGATTTCAAGTACTCTGACGGCCTCACTGTAGTGGGTATCTCCTTCTGTACAGCTATTGTCTGTGAGGCCATCTCATGGATTCTCATTTACCGCACCAATTCTTACAAGAACCTTCGGTCCTCCATTGACAAAGCATCCAAGAAACTCGAGACTATGAAGACCGACAGCAACAAAATCACCATTAAGAAGTCCAAGACCAAAAAAATTGACCGTGTTGAGACAAGCCTCAAAGAATCTAGTCGTGACTTGTCTCTCTTCAAGTTCAAATCAGGGGGTGTGGTTGCTCTTGTTCTCTTTGTGGTATTTGGATTGCTAAATTCACTCTTCGAAGGCAAGGTAGTTGCCAAATTGCCGTTCCAGCCTTTTGGGCTTGTTATGAAGATGAGCCATCGTGGGCTGCAAGGTAATGATCCCACTGATTGTTCCATGGCGTTTCTATACTTCTTGTGTTCCATTAGTATCAGAACAAATCTGCAGAAGTTCTTGGGTTTTGCACCACCAAGGGGTGCAGGTGCTGGTCTCTTTCCAATGCCAGACCCCAAGACCAGTTGA 570 0.4509 MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWILIYRTNSYKNLRSSIDKASKKLETMKTDSNKITIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFQPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMPDPKTS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01973 189 PANTHER PNAS-RELATED 7 188 IPR008559 GO:0005262|GO:0005789|GO:0032469
Vifa5g01973 189 SMART DUF106_2 12 172 IPR002809 GO:0016020
Vifa5g01973 189 Pfam Integral membrane protein EMC3/TMCO1-like 15 171 IPR002809 GO:0016020
Vifa5g01973 189 Coils Coil 41 61 - -
Vifa5g01973 189 PIRSF UCP023322_TM_coiled-coil 3 189 IPR008559 GO:0005262|GO:0005789|GO:0032469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01973 K21891 - gmx:100782593 334.724