Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01972 ATGCCTAGGAATAAGGTCGATCCTCATGTTGTAGGGAGTGTGATAGGAGATGTTTTGAACCCTTTTACAAACTCTGTATCTTTGAGTGTTGTCATCAATAACAAAGAAATTAGCAATGGCTGTCTTTTGAAACCCTCACGATTAGTTAACCGTCCAAGGGTTAGTGTTGGTGGTGAAGATCTTAGGACTTTCTACACATTGGCTATGGTGGATGCAGATGCGCCTAGCCCTAGTAACCCTTTTTTGAGGGAATACTTGCATTGGATGCTGACGGATATTCCAGCCACAACAAGTGCAAGCTTTGGGAAAGAGGCAGTGTTTTATGAGAGTCCAAAACCTTTGGCGGGGATTCATCGATTTGTTATTGTATTATTCAAACAACTGGGCAGAGACACAGTTTTTGCTCCAGAATGGCGTCATAATTTCAACACTAGAAGCTTTGCTGAGATTAACAATCTTGTAATTGTTGGATCGGTTTATTTCAACTGCCAAAGAGAGCGTGGTTGCGGTGGAAGAAGATGCTAA 525 0.419 MPRNKVDPHVVGSVIGDVLNPFTNSVSLSVVINNKEISNGCLLKPSRLVNRPRVSVGGEDLRTFYTLAMVDADAPSPSNPFLREYLHWMLTDIPATTSASFGKEAVFYESPKPLAGIHRFVIVLFKQLGRDTVFAPEWRHNFNTRSFAEINNLVIVGSVYFNCQRERGCGGRRC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01972 174 Gene3D - 3 169 IPR036610 -
Vifa5g01972 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 13 167 IPR035810 -
Vifa5g01972 174 Pfam Phosphatidylethanolamine-binding protein 63 132 IPR008914 -
Vifa5g01972 174 SUPERFAMILY PEBP-like 13 166 IPR036610 -
Vifa5g01972 174 CDD PEBP_euk 33 163 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01972 Vifa-Chr5 656732713 656734748 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01972 K16223 - gmx:100796994 250.366