Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01971 ATGGCCGGTAGTAGCAGGAATCCTCTTGCTGTTGGTCGTGTAATTGGTGATGTGATAGACTCCTTTGAAAGTTCTATTCCTCTCCGGGTCACTTATGGTAATAGAGATGTGAATAATGGTTGTGAGCTTAAACCCTCTCACGTTGGCAATCAACCCAGAGTGAGTGTTGGTGGAAACGACCTCAGGAACATCTATACCCTAGTTCTTGTGGATCCTGATTCACCTAGCCCAAGTAACCCTACTTTTAGGGAGTATCTTCATTGGTTGGTGACTGATATTCCAGCAACTACTGAGGTCAGTTTCGGTAACGAGATTGTGAGTTACGAAAGGCCACGACCTACCTCGGGGATCCATCGTTTCGTGTTCATATTATTTCGCCAGCAGTGTAGACAAAGGGTTTATGCTCCGGGATGGCGACAGAATTTCAACACAAGAGAATTTGCTGAACTCTATAATCTTGGATCACCAGTTGCTGCTGTTTTCTTCAACTGTCAGAGGGAGAGTGGCTCTGGTGGAAGAACATTTAGATAA 531 0.4501 MAGSSRNPLAVGRVIGDVIDSFESSIPLRVTYGNRDVNNGCELKPSHVGNQPRVSVGGNDLRNIYTLVLVDPDSPSPSNPTFREYLHWLVTDIPATTEVSFGNEIVSYERPRPTSGIHRFVFILFRQQCRQRVYAPGWRQNFNTREFAELYNLGSPVAAVFFNCQRESGSGGRTFR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01971 176 Pfam Phosphatidylethanolamine-binding protein 61 160 IPR008914 -
Vifa5g01971 176 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Vifa5g01971 176 FunFam Terminal flower 1 2 173 - -
Vifa5g01971 176 Gene3D - 2 170 IPR036610 -
Vifa5g01971 176 CDD PEBP_euk 27 164 IPR035810 -
Vifa5g01971 176 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Vifa5g01971 176 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 167 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01971 Vifa-Chr5 655158874 655159929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01971 K16223 - gmx:100781509 313.153