Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01964 ATGGAATTGACAATGAAGGTTGCTGAAGCTGTCCATGTACTGAACCACGATACCCAATCATGCAACCGCGTCGCAGCCAATCAATGGCTCGTTCAGTTTCAACAAACTCACGCCGCTTGGGATGTCGCCACCAACATCCTCACCTCCGATCTCCGCCACACTTCCGATTTCGAAGTCGAGTTCTTCGCTGCTCAGATTCTCAAACGCAAGATACAAAATGAAGGTTATCTACTGCAATCAGGACCCAAGGATGCTTTGTTAAATGCTCTTCTTCTTGCCGTCAAAAGATTCAGTAGCGGTCCTCCTCAGCTTTTAACCCAAATATGTCTTGCACTCTCTTCTCTCGTACTTCAAGTTGTTGCTCATGGAAACCCAATTGAGCAGCTCTTTTACAGTCTCCGGAGTCTGCAGAGCGAAGAAAATGGCAATATTGCTGTCCTGGAGATGCTCACTGTCCTGCCGGAGGAAGTTGTTGACAACCAACGTATTGATTCTAAAATTAATTCGTTACATAAAAGCCACTATACCCAAGAGCTTCTCTCTCATACACCCATGGTTCTCGAGTTCCTGCTGCGGCAATCTGAAATAAATTATGATGGTTCTGTACAACAGAACGAAAGGAACAGAAAAATTTTGCGCTGCTTATTGAGCTGGGTTAGAGCAGGTTGCTTTTCTGAGATTTCTCCAGGAACATTAGCAGCTCACCCACTTCTTAATTTTCTGTTCAACTCATTGCAGGACTCTACATCATTTGATTTTGCCATTGAAGTTCTTGTTGAACTTGTGACTAAACACGAGGGAGTGCCCCAAATTTTGTTATGCAGAGTACATTATCTGAAGGAGGTACTTCTTTTTCCAGCTCTTAATAGGGGAGACATTAAAGTAATTGGTGGCCTTGCATGCTTATTGTCAGAAATTGGGCAGGCTGGTCCATCTCTAATTGTAGAAGCAAGTGCAGAAGCCCTTGTGCTGACAGATGCACTTTTGAGCTGTGTGGCATTTCCAAGTGAAGATTGGGAGATTGCCGACTCAACACTACAGTTTTGGTCCACTCTTGCAAGCTATATACTTGGCATTGACGTAGATGGTGCAAAAAGAAAACACGTGAAAGCCATTTTTTCACCTGTGTTCTCAGCATTGCTCGATTCACTGTTAATACGTTCTCAGGTGGATGATTCTACATACAATGATGAAGGAAGAGTGATCGATTTTCCTGATGGCCTTGTGCATTTCAGAATGAACCTCGTAGAACTTTTGGTGGATATATGTCACCTGTTAGGATCTGTGATATTTATGCAAAAGCTCTTTATAGGTGGGTGCGCATCTTTGAATCAATCACTACCTTGGAAAGAAATGGAAAGCAAGTTGTTTGCTCTTAATGCTGTTGCCGATGTTATCATACAGGATGGCCAAAGTTTTGATCTCTCTGCAGTCATGCAGTTGGTGACCATGTTATCGAGTAAGCCTTGTGACGGCTTAAAGGGTTTCATTTGCATTGTATACAGATCTCTAGCGGATACTATTGGTTCTTATTCCAAGTGGATATCTGCTTTTAAGGAGAATTTTAGACCCTTGCTATTACTTCTTGCTATTGGGATTTCTGAACCTCTTTCCTCAAATGCCTGTGCGTGTGCCCTACGTAAAGTCTGTGAAGATGCTCCCATAGTAATTTATGAACCTTCACATTTGGAAATCTTAATGTGGATAGGAGAGGGGTTAGAGAAGTGGCATTTACCTTTGGAAGATGAGGAAGAAGTTATGCATGCAATAAGTCTGGTCCTTGGTTCTGTTCCCAATCTAGAATTGAAGAGCAACTTATTGGCTAAATTGCTATCGTCTAGCTATGAAGCTATTGGGAAACTTGTTAATCCAGAAAACGTTTCTCTTAAACAGAATCCCGCATCTTATGCACATACTTTGAATGCTGCCTCTAGAGGACTGCACAGAATAGGAACTGTATTCAGTCATCTTTCAACATCTGTAGCAACTGAACCTGCTGCAGATGACTTGATACTCTTACTGCTAAGGGTTTTCTGGCCCACCTTGGAGAAAGTATTTACCTCCGAGCATATGGAGAGTTGTAATTTATCGATAGCAGCTTGCCGAGCTCTTTCCTTAGCTATTCAATCTTCAGGTCAGCATTTTGTGACCCTACTGCCCAAAGTTCTGGATTGGCTATCGACAAATTTTGTTTTGTTCCAAAATCACGAGTGCTATATAAGAACTGCTTCCATAGTCATTGAAGAATTTGGTCATCAAGAGGAGTATGGACCTTTATTTGTTACCATGTTTGAAAGATTTACTCATTCAAATTCTGTAATGGCTCTAAATTCCTCCTACATATGTGACCAAGAACCTGACTTAGTGGAGGCTTACACCAATTTTGCCTCCATATTTATTCGCTCCTGTAACAAGGATGCCCTTTCCGTTTGTGGTTCTCTGCTTGAAGTTTCTATCCAAAAAGCAGCGATATGCTGCACAGCCATGCACCGTGGGGCTGCCCTTGCTGCAATGTCATATTTGTCTTGTTTCTTAGATGTAGGCCTTCTCTCTTTGTTAGAATCTATGAATTGTATTACTGAGGGGTCATCCAACACCACAGCCATTCATGTCATATCCCATAGTGGTGAGGGACTTGTATCTAATGTGGTGTATGCCTTACTCGGTGTGTCTGCAATGTCACGTGTTCACAAGTGTGCAACAATACTACAACAACTGGCAGCGATTTGCACTTTATCTGAAAGAACATCATGGAAGTCTATACTTTGCTGGCAAACTCTTAACGGATGGCTACAGTCAGCGGTTCAGGCTCTTCCTGCCGAATACCTAAACCAAGGAGAAGCAGAGACCCTACCGCCCCTATGGTCCAAAGCCCTTGCTGCTGCTGCCTCTGATTATCTTGAGAGCAAAAACTCGAATGGATTGAAGAGCGATTTTGGACATATGCAAGGGAAGGGTGGGAGAGTTTTAAAGCGTCTGGTACGAGAATTTGCCGATGCTCACCGAAATATTCCAAACCTGACTTGA 3027 0.4275 MELTMKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATNILTSDLRHTSDFEVEFFAAQILKRKIQNEGYLLQSGPKDALLNALLLAVKRFSSGPPQLLTQICLALSSLVLQVVAHGNPIEQLFYSLRSLQSEENGNIAVLEMLTVLPEEVVDNQRIDSKINSLHKSHYTQELLSHTPMVLEFLLRQSEINYDGSVQQNERNRKILRCLLSWVRAGCFSEISPGTLAAHPLLNFLFNSLQDSTSFDFAIEVLVELVTKHEGVPQILLCRVHYLKEVLLFPALNRGDIKVIGGLACLLSEIGQAGPSLIVEASAEALVLTDALLSCVAFPSEDWEIADSTLQFWSTLASYILGIDVDGAKRKHVKAIFSPVFSALLDSLLIRSQVDDSTYNDEGRVIDFPDGLVHFRMNLVELLVDICHLLGSVIFMQKLFIGGCASLNQSLPWKEMESKLFALNAVADVIIQDGQSFDLSAVMQLVTMLSSKPCDGLKGFICIVYRSLADTIGSYSKWISAFKENFRPLLLLLAIGISEPLSSNACACALRKVCEDAPIVIYEPSHLEILMWIGEGLEKWHLPLEDEEEVMHAISLVLGSVPNLELKSNLLAKLLSSSYEAIGKLVNPENVSLKQNPASYAHTLNAASRGLHRIGTVFSHLSTSVATEPAADDLILLLLRVFWPTLEKVFTSEHMESCNLSIAACRALSLAIQSSGQHFVTLLPKVLDWLSTNFVLFQNHECYIRTASIVIEEFGHQEEYGPLFVTMFERFTHSNSVMALNSSYICDQEPDLVEAYTNFASIFIRSCNKDALSVCGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLLSLLESMNCITEGSSNTTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTSWKSILCWQTLNGWLQSAVQALPAEYLNQGEAETLPPLWSKALAAAASDYLESKNSNGLKSDFGHMQGKGGRVLKRLVREFADAHRNIPNLT 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01964 1008 Coils Coil 990 1008 - -
Vifa5g01964 1008 FunFam ARM repeat superfamily protein 2 958 - -
Vifa5g01964 1008 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 6 1003 - -
Vifa5g01964 1008 Pfam Exportin 1-like protein 101 258 IPR013598 -
Vifa5g01964 1008 SUPERFAMILY ARM repeat 1 813 IPR016024 -
Vifa5g01964 1008 Gene3D - 3 965 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01964 K15436 - gmx:100808691 1717.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01964 5 651985403 652013083 Vifa5g01964 5 651985403 652013083 ECH