Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01950 ATGAAGAACAAAACAGCAAAGTTGCTGAAGGAAATTATAGCCGGTTTAACCTTAATGACAAAGTCAAAAACTATGGCTTTAAAGTCAAAAGTAAATGCCATCAAAGCTCGTTTGATTATATTCTCACTCATGAAGAACAAAAAGCTCCTCATGAGTTCAATTTCAGATAGATTCCATTCAATTTGGGGGAACCATTCTCATCATCATTCCAAGGAAGATTGCTTAATTGAAGAAGGTGTCAATTGCGAAGATCATCATCGAGCCATGGTTATTTTTAACAACAATGCTCGCACTTACGGAGCGTTGCAAAATCCAAGTGAAACACAAGTTTTGGATGAACAAGATCAAGAAGATTACTATGAAGATGATGAAGATGATGATGATAAGTATCCTGATTTGACTCACAGTCTTTTTGATTCAGAGGGATTGGATTTTGGAGGATCAGTGATAGATAGGGTGAAGAATTGTAAGGAAGAAGCAGGGAAAGAGTTTAAACTTGAAGATGATATTGATGAAGTTGCTGATCTTTTTATCAGAAGGTTTAGAAGGAATATAATCTTGCAGAAACAAGATTCGTTGAAGAGGAAGAGAGAAACCGCGCAAAATGGTTCCTGA 615 0.3626 MKNKTAKLLKEIIAGLTLMTKSKTMALKSKVNAIKARLIIFSLMKNKKLLMSSISDRFHSIWGNHSHHHSKEDCLIEEGVNCEDHHRAMVIFNNNARTYGALQNPSETQVLDEQDQEDYYEDDEDDDDKYPDLTHSLFDSEGLDFGGSVIDRVKNCKEEAGKEFKLEDDIDEVADLFIRRFRRNIILQKQDSLKRKRETAQNGS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01950 204 MobiDBLite consensus disorder prediction 111 129 - -
Vifa5g01950 204 Pfam Cotton fibre expressed protein 167 198 IPR008480 -
Vifa5g01950 204 PANTHER EMB|CAB67623.1-RELATED 2 200 - -
Vifa5g01950 204 MobiDBLite consensus disorder prediction 107 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01950 Vifa-Chr5 648618843 648619457 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01950 - - tpra:123889906 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01950 5 648618843 648619457 Vifa5g01950 5 648618843 648619457 ECH