Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01921 ATGAAGACACATTCATTTGTTGTAGCGAAAAGAATGTGGAATGTATTGAGAATCACATTTTTGATGATGCGGAAAGGTTTTATGTCAAAGAGGAAGATGATTATTGATATGAATTTGATGATGAAGAAAGGGAAAGTGCTAAGAAAATCATTGAGCAATTTAATGTCATCTACACAAAATCGTCACCGGAATAAAATTGGTGGCGGATTTATGGTACATGATTATGAATTTTCTTGTAGTAATAGTCCAAATCCGGGTTATTTCAATCTGTCAAAACGTAAGCATCATTTCAATTTTCCTTGTATTAATGCTCCTGAGGTTATTGAAGATGAAACTTTACCTTGTTATCAATTGTCACCACTTGAAATTGAAAATGTGTGTAAGAGTAGTGTGGCTATGGTGCCTAAGACTCCTGAATATACATTCAATTTTAGGTTTGATCCATCTGAAGAGAGAAAAAGCCCACGTTTTTCTGTGAGGGTTTCTAATTACTCTGCATTGGAGGAAAACGAAGAGATTGGAAATTGTCAAGTTGATGATGAAGCTGAGGATTTCATTAGAAAGTTCTATGAGCAGCTAAGGACGCAAAGCCGTGTCCAATTGCCGGGGTTTTAA 615 0.3561 MKTHSFVVAKRMWNVLRITFLMMRKGFMSKRKMIIDMNLMMKKGKVLRKSLSNLMSSTQNRHRNKIGGGFMVHDYEFSCSNSPNPGYFNLSKRKHHFNFPCINAPEVIEDETLPCYQLSPLEIENVCKSSVAMVPKTPEYTFNFRFDPSEERKSPRFSVRVSNYSALEENEEIGNCQVDDEAEDFIRKFYEQLRTQSRVQLPGF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01921 204 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 6 200 - -
Vifa5g01921 204 Pfam Cotton fibre expressed protein 177 197 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01921 Vifa-Chr5 557697170 557697784 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01921 - - gmx:100790324 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01921 5 557697170 557697784 Vifa5g01921 5 557697170 557697784 ECH