Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01920 ATGGAATCAAGTTTCATAAACCTAAAACTCATTTCATGCAAAGACATTCACGCCTTCAACTTCTTCCAAAAACTAACGCTCTACGCGCAAGCCTCAATCTCCTCCAACAACCCCAGAATCCAACTCAACGAACGAAACACACAGCAACAACGAACACAAACACACAGAGACATCGAAGAAGACGGAACCAACCCCGAATGGAACTGTGATATGCGTTTCGATTTAGCTTTTCTTTCCTCGCATTCAGATCCCGCCGAGTTTTTCCTATGTTTCGAGTTTCGTCACGACGGCGTCATCCTCGGCGACAAATTCATCGGGGAGAGCCGCGTTCCGATAACGGATCTGATCAACGACGTCGACGGTATCACGCGGTTCGTTAGCTACGAGATTCGTTCCGCCGAGGGGAAGCCGAACGGGATCTTCAATTTTTCGTATAAGACGGAGGGTGTTCAGATCCAATCGTTGCAGATTCTTGATGGGAGAATATCTGGTTATCCTGTTCTGACTCCGGAGGATTGTGCTCCTGCTCCGGTGATATATCCGATATCAGAAATCGAGAGACCGTGTTGTTATTCTACTGGGTGTTCTGTTCAGGAGAGACCGTTTCCGCCTACGGCGCCGCCTCCTGTTTCATATTCGTATGGCGGAGGATATGATTATTGTTATCCGCCGCCGCCGCCTTCGATGTATCAGTATCCTTCTCCGACTCCGCCGAGGGAGCGGATGTACCCACCTATTGGGCCTGAGGCTAGTCATTGGCAGCCCGGCCCGTATTTTGAAAACCGGTGGTGA 792 0.4987 MESSFINLKLISCKDIHAFNFFQKLTLYAQASISSNNPRIQLNERNTQQQRTQTHRDIEEDGTNPEWNCDMRFDLAFLSSHSDPAEFFLCFEFRHDGVILGDKFIGESRVPITDLINDVDGITRFVSYEIRSAEGKPNGIFNFSYKTEGVQIQSLQILDGRISGYPVLTPEDCAPAPVIYPISEIERPCCYSTGCSVQERPFPPTAPPPVSYSYGGGYDYCYPPPPPSMYQYPSPTPPRERMYPPIGPEASHWQPGPYFENRW 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01920 263 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
Vifa5g01920 263 PANTHER INGRESSION PROTEIN FIC1 6 183 - -
Vifa5g01920 263 CDD C2_SRC2_like 6 143 IPR044750 GO:0006952
Vifa5g01920 263 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 118 IPR035892 -
Vifa5g01920 263 Gene3D C2 domain 2 143 IPR035892 -
Vifa5g01920 263 MobiDBLite consensus disorder prediction 39 63 - -
Vifa5g01920 263 Pfam C2 domain 7 115 IPR000008 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01920 - K22733 tpra:123891712 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01920 5 557468818 557469609 Vifa5g01920 5 557468818 557469609 ECH