Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01891 ATGTTGAGGGTTGCATCCAAGAGGCTTTCATCTCTCTCATGGAGAGCCAACCACGCCGCATCCGCTTTCGTCTCTAAGAACCCCATCGCACCGCCTTCTTCCGATGAACGCAGATCTGATCCCTTTTCGATCCATTCCGAATTCTTTCTTCCCTTCAGAGGTTTTGCTAGTGAATCACTAATCCATGCAAAAGAAAACAGCATTCTTCCTGAAATCCCCGCAACTGTTACCGCTGTTAAAAATCCATCTTCTAAGATTGTATATGATGAGCACAACCATGAACGATTTCCTCCTGGTGACCCAAGCAAGAGAGCATTTGCATACTTTGTCCTAACTGGTGGAAGGTTTGCTTATGCTTCTGTGATCCGTCTTCTTGTCCTCAAGCTTGTCCTCAGCATGTCTGCAAGTAAGGATGTTCTTGCTATGGCTTCACTTGAAGTTGATCTCTCCAGCATTGAGCCCGGCACTACTGTCACTGTTAAGTGGCGTGGAAAGCCAGTTTTCATCAGGCGCAGAACCGATGACGATGTGCAGTTGGCAAACAGTGTTGATATTGGATCTCTTCGCGACCCTCAGCAAGATGCCGACAGAGTCAAGAACCCAGAATGGCTTGTTGTGATTGGTGTTTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCCGGAGACTATGGTGGGTGGTTTTGCCCATGCCATGGATCACATTATGATATTTCTGGCAGAATTAGGAAGGGACCTGCACCATACAATCTGGAGGTACCAACTTATTCATTCTTGGAGGAAAATAAGTTGCTGATCGGTTAA 804 0.4652 MLRVASKRLSSLSWRANHAASAFVSKNPIAPPSSDERRSDPFSIHSEFFLPFRGFASESLIHAKENSILPEIPATVTAVKNPSSKIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDIGSLRDPQQDADRVKNPEWLVVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01891 267 NCBIfam ubiquinol-cytochrome c reductase iron-sulfur subunit 119 267 IPR006317 GO:0008121
Vifa5g01891 267 Gene3D - 136 267 IPR036922 GO:0051537
Vifa5g01891 267 SUPERFAMILY ISP domain 132 266 IPR036922 GO:0051537
Vifa5g01891 267 CDD Rieske_cytochrome_bc1 144 267 - -
Vifa5g01891 267 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 74 267 IPR014349 GO:0051537
Vifa5g01891 267 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 177 265 IPR017941 GO:0051537
Vifa5g01891 267 FunFam Cytochrome b-c1 complex subunit Rieske, mitochondrial 137 267 - -
Vifa5g01891 267 Pfam Rieske [2Fe-2S] domain 150 253 IPR017941 GO:0051537
Vifa5g01891 267 SUPERFAMILY ISP transmembrane anchor 84 140 - -
Vifa5g01891 267 PRINTS Rieske 2Fe-2S subunit signature 227 239 IPR005805 GO:0016020|GO:0051537
Vifa5g01891 267 PRINTS Rieske 2Fe-2S subunit signature 239 251 IPR005805 GO:0016020|GO:0051537
Vifa5g01891 267 PRINTS Rieske 2Fe-2S subunit signature 205 216 IPR005805 GO:0016020|GO:0051537
Vifa5g01891 267 Pfam Ubiquinol cytochrome reductase transmembrane region 89 138 IPR004192 GO:0008121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01891 K00411 - gmx:100806917 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01891 5 547645784 547647882 Vifa5g01891 5 547645784 547647882 ECH